| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3480 |
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| Symbol | |
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| ID | 5197661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3825665 |
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| End bp | 3827569 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583029 |
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| Product | ABC transporter related |
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| Protein accession | YP_001263964 |
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| Protein GI | 148556382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00549576 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAATT TCTCGAATCT CACCGTCCGT CTCGGCGGCC GCACGATCCT CGACCGCGCC
TCGGCGGCGC TGCCCCCGCG CGCCCGCGTC GGGCTGATCG GCCGCAACGG CGCCGGCAAG
TCGACCCTGA TGAAGGTGAT GATCGGCTCG CTGGAGGCCG ACGACGGCGA TCTCGACAAG
CCGCGCGACC TGCGCATCGG CTATATCGCG CAGGAGGCGC CGAGCGGCAC GTCGACCCCG
ATCGACACCG TCCTCGCCGC CGACAAGGAG CGCGCCGCGC TGCTGCTCGA AAGCGAGACC
TGCGAGGATC ATGATCGCCT CGGCGACGTC TATGAGCGCC TCCTCGCGAT CGACGCCTAC
ACCGCCCCCG CGCGCGCCTC GACCATCCTC GTCGGTCTGG GCTTCGACGA GGAGATGCAG
AACCGCCCGC TCGACAGCTA TTCGGGCGGC TGGAAGATGC GCGTCGCGCT CGCCGCCCTG
CTCTTCTCGG AACCGGACCT GCTGCTGCTC GACGAGCCGT CGAACCATCT CGACCTCGAA
GCGACGCTGT GGCTGGAGAA TTTCCTCAAG AGCTACCCGG CGATGATGGT CGTGATCAGC
CATGAGCGCG ATCTGCTCAA CAACGTCGTC GACCATATCC TCCATCTGGA GGGCGGCAAG
ACCACGCTCT ACACCGGCGG CTACGACAGC TTCGAGCGGC AGCGGGCCGA GCGCGCCGCC
CAGCTCGCCG CCGCCCGCGC CGCGCAGGAC GCGCAGCGCG CCAAGCTGCA GGACTATATC
GCCCGCAACA GCGCCCGCGC CTCGACCGCC AAGCAGGCGC AGTCGCGCGC CAAGGCGCTG
GCCAGGATGC AGCCGATCGT CGCGATGGTC GAGGACCCGA GCCTGTCGAT GGACTTCCCC
TCGCCGGCCG ACGGGCTGAA GCCGCCGCTG ATCACGCTCG ACATGGCCAG CGTCGGCTAT
GTCGCGGACA GGCCGGTGCT GCAGCGGCTC AACCTGCGGC TCGACCCCGA CGACCGGATC
GCCCTGCTCG GCCGCAACGG CAACGGCAAG ACCACGCTCG CCCGCCTGCT CGCAGCCCAG
CTCAGGCCGA TGGACGGCGG GATCGCTGCG GCCGGCAAGA TGCGGGTCGG CTACTTCACC
CAATATCAGG TGGAGGAGCT CGACGTCGAC GACACCCCGC TCGAGCATAT GACCCGGATC
ATGAACGGCA AGACGCCGGC CGCGGTGCGC GCCCAGCTCG GCCGCTTCGG CTTCTCGGGC
GACCGCGCGA CGCAGAAGGT CGGCAAGCTC TCGGGCGGCG AGCGCGCCCG CCTCGCGCTG
GCGCTGATCA CGCGTGACGC GCCACACATG CTGATCCTCG ACGAGCCGAC CAACCACCTC
GACGTCGACG CGCGCGAGGC GCTGGCCCAG GCGCTCAACG CCTATGAGGG CGCGGTGGTG
ATCGTCAGCC ACGACCGCCA CATGATCGAG CTCGCCGCCG ACCGCCTGGT CCTGGTCGAC
GGCGGCACCG CCCGCGAATT CTCCGGCACC CTCGACGATT ACACCGACCT GATCCTCGGC
AAGAACCAGC CCAGGGGCGG CGAGGGCGCG GGCGCCGGGA ACGCCGGCAA CGGCGGCGGC
GCAGGCAAGG CCGCGAAGAA GGACAAGAAG GCCGCGGCGC AAGCGCGCGA GCAGCTCTCG
ACGCTGCGCA AGTCGGTCAG GACGATGGAG GACCGCATCG CGACCCTGAC GGCCCGTCGC
AGCGAAATCG ACCGCGCGAT GTTCGATCCC AAGTCGGCCA GCCCGGCCGA TGCCAAGCGC
ACCACCAGCG ACCTGATGAA GCTCCGCGCC GACGTCGAGC GCGAGCTGGA GACGGTCGAG
GCGGAATGGC TGGAGGCGAA CGAGGCGCTG GAGGCGGTGG CTTGA
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| Protein sequence | MLNFSNLTVR LGGRTILDRA SAALPPRARV GLIGRNGAGK STLMKVMIGS LEADDGDLDK
PRDLRIGYIA QEAPSGTSTP IDTVLAADKE RAALLLESET CEDHDRLGDV YERLLAIDAY
TAPARASTIL VGLGFDEEMQ NRPLDSYSGG WKMRVALAAL LFSEPDLLLL DEPSNHLDLE
ATLWLENFLK SYPAMMVVIS HERDLLNNVV DHILHLEGGK TTLYTGGYDS FERQRAERAA
QLAAARAAQD AQRAKLQDYI ARNSARASTA KQAQSRAKAL ARMQPIVAMV EDPSLSMDFP
SPADGLKPPL ITLDMASVGY VADRPVLQRL NLRLDPDDRI ALLGRNGNGK TTLARLLAAQ
LRPMDGGIAA AGKMRVGYFT QYQVEELDVD DTPLEHMTRI MNGKTPAAVR AQLGRFGFSG
DRATQKVGKL SGGERARLAL ALITRDAPHM LILDEPTNHL DVDAREALAQ ALNAYEGAVV
IVSHDRHMIE LAADRLVLVD GGTAREFSGT LDDYTDLILG KNQPRGGEGA GAGNAGNGGG
AGKAAKKDKK AAAQAREQLS TLRKSVRTME DRIATLTARR SEIDRAMFDP KSASPADAKR
TTSDLMKLRA DVERELETVE AEWLEANEAL EAVA
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