| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3456 |
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| Symbol | |
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| ID | 5200975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3792229 |
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| End bp | 3794046 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583004 |
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| Product | hypothetical protein |
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| Protein accession | YP_001263940 |
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| Protein GI | 148556358 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.203936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.029844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAC GTCAATTCAT CGGCTCGACC GGTCTCGCCC TTCTCGCCGG CATGATGCCG
CGCCTGGCCG AGGCCGCGGC GACCGGCACC GCGGCCGACA AGCAGCTCGC CGCGATGGTC
GAGAGGATGT TCGAGAAGCA GCTCGACGAC AGCCCCGAGA CCGCGACCAG CCTCGGCCTC
GACAAGGGCG CCCGCGCCGG ACAGAAGAGC AAGCTCGACG GCTACACCAA GGCCGACCAG
GCCAGGACCC TCGCCGAGGA CAAGGCGTCG CTCGCCGCGC TGCGCAAGCT CGACCGCGCC
GCGCTGTCGC CCGCCGCGCA GCTCAACTAC GACGTCGTCG TCTATATGGT CGAGCAGACC
ACCAGGGGCG GCTCCAAATA TCCCTATGGC AGCAGCAGCG AATATTATGT CCCCTATGCG
ATCAGCCAGC TCAGCGGCCC CTATGCCTCG GTCCCGGACT TCCTCGATTC GCAGCATGTG
ATCGAGACGA AGGACGACGC CGACGCCTAT GTCGCGCGCC TGCACGAATT CGCCCGCGTC
CTCGACGAAA GCACCCGCTT CCAGCAGGAC GACGTCCGCT ACGGCGCCTT CGCCCCCGAT
TTCTGCCTCG ATCTCGCGCT CGGGCAGCTC CGGGCGCTGC GCGACCAGCC GGCGGCGAAG
ACCGTCCTCG TCGACTCGCT CGTCCGCCGG ACGGCCGAGA AGAAGATCGC CGGCGACTGG
GGCGCCCGGG CCGAGACGAT CGTCGCCGCC GAAATATTCC CCGCGCTCGA CCGGCAGATC
GCGCTCGTCA CCGGCCTGCG CAAGGCGGCC AGCCATGACG CGGGTTGCTG GCGCCTGCCC
AAGGGCGACG AATATTATGC CGACGCGCTG ATGAACGCGA CGACGACGAC GCTCTCGCCC
GAGGAGGTCC ACCAGATGGG CCGCGAGCAG GTCGCCGAGA TCAGCGGCCA GATCGATGCG
ATCCTGAAGA AGGAGGGCAT GACCAAGGGG ACCGTCGGTG AGCGGCTGAC CGCGCTCAAC
AACGATCCGA AGCAGCTCTT CGCCAACACC GACGCGGGCC GGGCCGAGCT GATCGACTAT
ATCAACGGGC TGGTGAAGGC GATGGAGGTG AAGCTGCCCG AGGCGTTCGC GACCCTGCCC
AAGGCGCCGC TCGAGGTGAA GCGGGTGCCG CCCTTCATCC AGGACGGCGC GCCCAACGGC
TATTACAACT CGGCCGCGCT CGACGGTTCG CGCGGGGCGA TCTACTATAT CAACCTCAAG
GATACCGCCG ACTGGCCGCG CTACGGCCTG CCCAGCCTGA CCTATCATGA GGGCACGCCG
GGCCATCACC TCCAGATCAG CCTCGCCCAG GAGGCGAAGG ACCTGCCGAT GCTGCGCAAG
GTCGCGCCGT TCGGCGCCTA TGTCGAGGGC TGGGCGCTCT ATGCCGAGCA GCTCGCCGAC
GAGATGGGCG TCTATGAAAA GGACCCGATC GGCCGCGCGG GCTTCCTGCA GAGCTTTCTG
TTCCGCGCGG TCCGGCTGGT CACCGACACC GGCATCCACT TCAAGCGCTG GAGCCGCGAG
CAGGCGACCG ACTACATGGT CGAGGCGACC GGCTTCGCCC GCCCCCGCAC CCAGCGCGAG
GTCGACCGCT ACTGCATCTG GCCGGGCCAG GCGTGCAGCT ACAAGGTCGG CCATATGAGC
TGGGTCAAGG CGCGCGAGAA GGCGAAGGCG ATCAAGGGCG CGGCGTTCGA CCTGCGCCAG
TTCCACGAGG TGCTGCTCGA AGGCGCGCTG CCGCTGACCA TCCTCGAACA GGTCACCGAG
GCGCGGGCGA AGGCATAA
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| Protein sequence | MDRRQFIGST GLALLAGMMP RLAEAAATGT AADKQLAAMV ERMFEKQLDD SPETATSLGL
DKGARAGQKS KLDGYTKADQ ARTLAEDKAS LAALRKLDRA ALSPAAQLNY DVVVYMVEQT
TRGGSKYPYG SSSEYYVPYA ISQLSGPYAS VPDFLDSQHV IETKDDADAY VARLHEFARV
LDESTRFQQD DVRYGAFAPD FCLDLALGQL RALRDQPAAK TVLVDSLVRR TAEKKIAGDW
GARAETIVAA EIFPALDRQI ALVTGLRKAA SHDAGCWRLP KGDEYYADAL MNATTTTLSP
EEVHQMGREQ VAEISGQIDA ILKKEGMTKG TVGERLTALN NDPKQLFANT DAGRAELIDY
INGLVKAMEV KLPEAFATLP KAPLEVKRVP PFIQDGAPNG YYNSAALDGS RGAIYYINLK
DTADWPRYGL PSLTYHEGTP GHHLQISLAQ EAKDLPMLRK VAPFGAYVEG WALYAEQLAD
EMGVYEKDPI GRAGFLQSFL FRAVRLVTDT GIHFKRWSRE QATDYMVEAT GFARPRTQRE
VDRYCIWPGQ ACSYKVGHMS WVKAREKAKA IKGAAFDLRQ FHEVLLEGAL PLTILEQVTE
ARAKA
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