| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3449 |
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| Symbol | |
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| ID | 5200167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3785218 |
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| End bp | 3787662 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640582997 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001263933 |
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| Protein GI | 148556351 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.206852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGA TCGACGCCGT CCTGCCCGAC CTGATCGCCG CGCTTCGCGA CGGGCCGAAC
GCCGTGCTCG TCGCCCCGCC GGGCGCGGGC AAGACGACGG CGGTGGCGCC GGCGCTGCTC
GGGCAAGAGT GGTGCGAGGG ACAAATCCTG TTGCTCTCCC CCCGCCGCCT CGCCGCCCGC
GCCGCGGCCG AGCGGATGGC CGAGCTGGCC GGCGAGCCGG TCGGCCGGAC GATCGGCTAT
GCCACCCGGC TCGACGCCAG GCAGTCGGCC GCCACCCGCA TCCTCGTCGT CACCGAGGGC
ATCTTCGTCA ACCGCATCCA GGCCGATCCC GACCTGCCCG GCGTCTCGGC GGTGCTGTTC
GACGAGGTCC ATGAGCGCAG CCTCGACAGC GATTTCGGCC TCGCCCTCGC GCTCGACGCG
CAGGCGGCGC TGCGGCCCGA CCTGCGCCTC GTCGCGATGT CGGCGACGCT CGACGGCGGG
CGCTTCGCAG CTCTCATGGG CGCCGCGCCG CTGGTCGAAA GCGAGGGGCG CAGCCACCCG
ATCGAGATTC GCCATGCCCC GCGATCGGCC GAGAAGCGGA TCGAGGACGA CATGGCAGCG
ACGATCCGCC GCGCGCTGGC GGAGGAGGGC GGCAGCCTGC TCGCCTTCCT CCCCGGCGTG
GCGGAGATCG AGCGCACCGC CGAGCGGCTC GAAGCGGGGT TGCCCGGCGA CGTCGTCCTC
CACCGGCTGC ACGGCTCGCT CGAACCCGCC GAGCAGCGCG CGGCGATCGC GCCCGCGCCG
CCGGGCAAGC GCAAGCTGGT GCTCGCCACG TCGATCGCGG AGACCAGCAT CACCATCGAC
GGGCTGCGCA TCGTCGTCGA TTCGGGGCTC GCCCGCCGGC CGCGCTACGA CCGCGCGGCG
GGGATGACCC GGCTCGTCAC CGAACGGGCC AGCCAGGCGG CGGCCACCCA GCGCGCCGGC
CGCGCCGGGC GCCAGCAGCC GGGCGTGGTC TATCGCCTGT GGGAGGCGGC GGCGACCGCC
GGCCTGCCCA AATATGACCC GCCCGAGATA TTGGAGACCG ACCTGTCGGC GCTGACGCTC
GACTGCGCGC TGTGGGGCGT CGCCGATCCG GGCACGCTGC GCTGGCTCGA TCCCCCGCCC
GAGGCCGCGA TCGGCGAGGC GCGCCAGCGG CTGGCGCGGC TGGAGGCGAT CGACGAGGAC
GGCCGCCCGA CCGCGCATGG CCGGGCGATC GCCGCGCTGC CGCTGCCGCC GCGCCTCGGC
CATATGCTGA TCCGCGCCGC CGAGGGCGGC TTCGCCGAGA CCGCGGCCGA GGTCGCGGTG
CTGCTTTCGG AACGCGGGCT CGGCGGCTCG GATGCCGATC TGGAGCTCAG GCTGCGGCGC
TGGCGCGGCG AGCGCGGCAA GCGGGCCGAG GGCGCGCGCC AGCTCGCCGG GCGCTGGGCG
CGGCTGGCGG GGAAGGGCGG CCGCGACGAC GCGATGATCG CCGATTGCGT CGCGCTCGCC
TATCCCGACC GGGTCGCGCG GCGGCGCTCG GCCTCGGGCG AGGACTGGAT CTCGCGCGGC
GGGCGCGGCT TCCGGCTCGA TCCCGCCTCG CCGCTGGCGC GCAACGAATG GCTCGCCGTC
GCCGAGATCC AGGGCGCGGC CTCGGGCGCG CGCATCCTGT CGGCGGCGCC GATCGACCCC
GACGAGGTCG AGCGGCTGTT CGCCGATCAT ATCGAGGTCC GCCGCACCGC CCGCTTCGAT
CCCGCGACCG GCGCGGTCGA GGCTCGGCGC GAGCGTCGGC TCGGCGCGAT CCTGCTCGCC
GCCGGGCGCG ACGAGACCGC CTCGCCGGCG ATGATCGGCG CCGCGCTGAT CGACGCGGTC
CGCACCCGCG GGCTCGACCT GATCGACTGG TCCGAGGGCG CGGCGGCGCT CCGCGCCCGC
GCCGCCTTCG CGGCCGAACA GGGCGGCGAA CTGCCCGACC TGTCCGATGC GACGCTGATG
CTCACCCTCG ACGACTGGTT CGCGCCGCTG GTCGAGGGCA AGCGCCGCCT GTCGGACATA
TCGGCGGCCG AGCTGTCGAA CGCGCTCCAC GGCCTGCTCG GCTGGGACGG GCGCCAGGCG
CTCGACCGGC TCGCGCCCGA GCATCTCCAG TCGCCGGCCG GCAGCCGCCA CGCGATCGAC
TATGCGGCCG AGGGCGGCCC GGCGGTCGAG GTGCGGCCGC AGGCGCTGTT CGGCCTGTCG
GCGCATCCGA TGGTGGCGGG CGGGCGGGTA CCGCTCACCC TGCGGCTGAC CTCGCCGGCC
GGCCGGCCGA TCCAGACGAC CAAGGACCTG CCCGGCTTCT GGGCGGGAAG CTGGACCGCG
GTCGCCAAGG AGATGCGCGG CCGCTATCCC CGCCATCCCT GGCCCGACGA CCCCGCCGCC
GCCGATCCGA CCCTGCGGAC CAAGAAAGCG GCGCAGCGTC CTTGA
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| Protein sequence | MLPIDAVLPD LIAALRDGPN AVLVAPPGAG KTTAVAPALL GQEWCEGQIL LLSPRRLAAR
AAAERMAELA GEPVGRTIGY ATRLDARQSA ATRILVVTEG IFVNRIQADP DLPGVSAVLF
DEVHERSLDS DFGLALALDA QAALRPDLRL VAMSATLDGG RFAALMGAAP LVESEGRSHP
IEIRHAPRSA EKRIEDDMAA TIRRALAEEG GSLLAFLPGV AEIERTAERL EAGLPGDVVL
HRLHGSLEPA EQRAAIAPAP PGKRKLVLAT SIAETSITID GLRIVVDSGL ARRPRYDRAA
GMTRLVTERA SQAAATQRAG RAGRQQPGVV YRLWEAAATA GLPKYDPPEI LETDLSALTL
DCALWGVADP GTLRWLDPPP EAAIGEARQR LARLEAIDED GRPTAHGRAI AALPLPPRLG
HMLIRAAEGG FAETAAEVAV LLSERGLGGS DADLELRLRR WRGERGKRAE GARQLAGRWA
RLAGKGGRDD AMIADCVALA YPDRVARRRS ASGEDWISRG GRGFRLDPAS PLARNEWLAV
AEIQGAASGA RILSAAPIDP DEVERLFADH IEVRRTARFD PATGAVEARR ERRLGAILLA
AGRDETASPA MIGAALIDAV RTRGLDLIDW SEGAAALRAR AAFAAEQGGE LPDLSDATLM
LTLDDWFAPL VEGKRRLSDI SAAELSNALH GLLGWDGRQA LDRLAPEHLQ SPAGSRHAID
YAAEGGPAVE VRPQALFGLS AHPMVAGGRV PLTLRLTSPA GRPIQTTKDL PGFWAGSWTA
VAKEMRGRYP RHPWPDDPAA ADPTLRTKKA AQRP
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