Gene Swit_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3447 
Symbol 
ID5200165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3783613 
End bp3783897 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content63% 
IMG OID640582995 
Productchorismate mutase 
Protein accessionYP_001263931 
Protein GI148556349 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.734851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.21213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG AGATCCTGAG CCGCTACCGC GAGAGCATCG ACAATATCGA TGCCGCGCTG 
ATCTTCATGC TGGCGGAGCG CTTCAAGATC ACCCAGGCGG TGGGCGAGCA CAAGGCCGCC
ACCGGCCTGC CCCCCGCCGA TCCGGGCCGC GAGCAGATCC AGATCGACCG CCTCCGCTCG
CTGGCGAAGA GCGCGAATCT CGATCCCGAC TTCTCGGAGA AATTCCTTCG CTTCGTTATT
GACGAAGTCA TCCACCATCA TCGCCGTGCC GGCGCTGATG GTTGA
 
Protein sequence
MADEILSRYR ESIDNIDAAL IFMLAERFKI TQAVGEHKAA TGLPPADPGR EQIQIDRLRS 
LAKSANLDPD FSEKFLRFVI DEVIHHHRRA GADG