| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3436 |
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| Symbol | |
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| ID | 5199194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3769135 |
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| End bp | 3770526 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582984 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001263920 |
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| Protein GI | 148556338 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.288452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.476438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC AGGGCATATT GGCGGGGCCG CGGATCAAGC GGCTGCGGCG CGACCATGGC
CATACCCAGC AGGCGATGGC CGAGATGCTC GGCATCTCCG ACAGCTATCT CGCGCTGATC
GAGGGCAATC GCCGGCCGCT GACCGCCGGG CTGATCCTCA AGCTCGCCGA GCTGTTCGAC
TTCGACATCC GCAGCCTCAG CCAGGAGGAG CCGGGCGGCG GATCGGCGGC GATGCGGCGG
CGGCTGTCCG ATCCGCTGTT CGCCGACCTG TCGATCGACC GCGCCGAACT GGAGGCGTGG
ATCGACAACG CGCCCGGCGG GATCGAGGCC TTCGCCCGGC TGTTCGACCG CTGGCGGGAG
GGCGGCGGCG CCGGCATGGC GGGCGAGGGC CCCAATCCGG TGATGGCGGC GCGGCGCGAG
ATCGAGCGGT GGCGCAACCA TTTCGCCGAT CTCGACGCCC AGGCCGAGGA ACTGGCCGAC
GAGCTGCGCA TCGGCGCGGG CGACCTCTAC GGCGCGATCG CCGAACGGCT GCGGGTCAAG
CATCAGCTCA CCATCCGCAT CCTGCCGTTC GACGTGATGC CCGACCGGTT GCGCCGGCTC
GACCTCCACG CCCGCCAGCT CCAGCTCTCC GAGCTGCTCG ACCCCGCCGC GCGCACCTTC
CAGGCGGCGT TCCAGCTCGC CCAGATCGAG GCGCGGGCGG GGATCGACGC GCTGGTCGCC
GGCGCGGCGT TCGGCGATCG CCCGGCCGAG CGGCTCTACC GCCGCCACGT CACCTCCTAT
TTCGCCGCCG CGCTGATGAT GCCCTATGGC CGCTTCCTGC GCGCCTGCGA GACGACCGGC
TACGACATCC AGCTGCTCCA GCGCCGCTTC GGCGCGGGGT TCGAGCAGGT CGCGCACCGG
CTGACCACCT TGCAGCGGGT CGGCGCGCGC GGGCTGCCCT TCTTCATGCT GCGGATCGAC
CGGGCGGGGC AATTGTCGAA GGGCTATGCC GGGGCCAGCG GCTCGGCGCT GATCGATGCG
GTCCACCGCT GCCCGCTCTG GGCGATCCAC CAGGCCTTCG ACCAGCCGGG CCGGCTGATC
CGCCAGCTTG CCGAACTCGA GGACGGATCG CGCTGGTTCA CCGTCGCGCG CAGCGTCCGC
CACCATGGCG GCGCGGCGGG CGTGCCGGCG GCCGAGCATG TCGTCGCGCT CGGCCTCGCC
GCCGACCATG CGGCGGCGCT GGCGATCGCG CGCGGGATCG ATCTCGGCGG CCCGGCCGAT
CCGATCGGCC TCGGCTGCAC CCATTGCCAG CGCGCCGACT GCGTCCAGCG CGCCGCCCCC
CCGCTCGGCC GCGCGCTCAC CATCAACGAA CGCGAACGCG GGCTGGCACC CTTCTCCTTC
GTCGGGGATT GA
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| Protein sequence | MAKQGILAGP RIKRLRRDHG HTQQAMAEML GISDSYLALI EGNRRPLTAG LILKLAELFD
FDIRSLSQEE PGGGSAAMRR RLSDPLFADL SIDRAELEAW IDNAPGGIEA FARLFDRWRE
GGGAGMAGEG PNPVMAARRE IERWRNHFAD LDAQAEELAD ELRIGAGDLY GAIAERLRVK
HQLTIRILPF DVMPDRLRRL DLHARQLQLS ELLDPAARTF QAAFQLAQIE ARAGIDALVA
GAAFGDRPAE RLYRRHVTSY FAAALMMPYG RFLRACETTG YDIQLLQRRF GAGFEQVAHR
LTTLQRVGAR GLPFFMLRID RAGQLSKGYA GASGSALIDA VHRCPLWAIH QAFDQPGRLI
RQLAELEDGS RWFTVARSVR HHGGAAGVPA AEHVVALGLA ADHAAALAIA RGIDLGGPAD
PIGLGCTHCQ RADCVQRAAP PLGRALTINE RERGLAPFSF VGD
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