Gene Swit_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3402 
Symbol 
ID5198761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3733954 
End bp3734364 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID640582949 
Producthypothetical protein 
Protein accessionYP_001263886 
Protein GI148556304 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0631046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CGCGCCCCCT GCCGGAGCCG ACGCCTGAGA CCGCAGCCTT CTGGAAGGCG 
GCCAGCGCGG GCGTGCTTCA ACTGCAGCGC TGCCTGAACG GCTGCGAGCG TGCCTATTTC
CCGCCGCGCA ACTTCTGCCC GCATTGTGGC AGCCGCAATG TCGGCGCCTT CGCGGCATCG
GGGCGGGCGA CGCTCTACAG CTATGTGATC AGCCATCGCC CCGCCCCCGG CTTCACGCCG
CCCTATGCCG TGGCCGTGGT CGAGCTGGAG GAAGGCCCAC GGATGATGTC GAACATCGTG
GACTGTGAAC AGACACCCGA GGCGCTCCTT CTCGATATGC CGCTGAAGCT CGTGTTCCAG
CGCCAGACCG ATGCGATCAG CCTGCCTTTC TTCACGCCGG ACCGGGGGTA A
 
Protein sequence
MSDTRPLPEP TPETAAFWKA ASAGVLQLQR CLNGCERAYF PPRNFCPHCG SRNVGAFAAS 
GRATLYSYVI SHRPAPGFTP PYAVAVVELE EGPRMMSNIV DCEQTPEALL LDMPLKLVFQ
RQTDAISLPF FTPDRG