Gene Swit_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3375 
Symbol 
ID5198844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3703836 
End bp3704123 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content62% 
IMG OID640582921 
Productchaperonin Cpn10 
Protein accessionYP_001263859 
Protein GI148556277 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0900877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCC GTCCGCTGCA CGATCGCGTG CTCGTCCGCC GCGTCGAGGC CGAGGAAAAG 
ACCGCCGGTG GGATCATCAT CCCCGACAGC GCCAAGGAAA AGCCGCAGGA AGGCGAAGTC
GTCGCCGTCG GCGGTGGCTC CAAGGCCGAG GATGGCAAGG TCACCCCGCT CGACGTCAAG
GCCGGTGACA AGATCCTGTT CGGCAAATGG TCGGGCACCG AGGTCAAGAT CAACGGCGAA
GACCTGCTGA TCATGAAGGA ATCCGACATC CTTGGCATTG TTGGCTGA
 
Protein sequence
MSFRPLHDRV LVRRVEAEEK TAGGIIIPDS AKEKPQEGEV VAVGGGSKAE DGKVTPLDVK 
AGDKILFGKW SGTEVKINGE DLLIMKESDI LGIVG