| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3374 |
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| Symbol | |
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| ID | 5200341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3701948 |
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| End bp | 3703714 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582920 |
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| Product | apolipoprotein N-acyltransferase |
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| Protein accession | YP_001263858 |
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| Protein GI | 148556276 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0635082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGTC AAGCGGACCC CTCCGGCATT TTTTCGCCGA TTGGCGAACG CGCCTCTTCC
CGGCGGTGCG GCGGTCGCGA TATGGGGGAG CGTCCGTGTG GTTCAAGCTG GGTGATGCGT
AAACTTATCC CGTTCAAATA CCCGGCGATC GCATTCGGCC TGGGGCTCGC CTCGGCGCTC
GGTTTCGCGC CGCTCAACTG GTGGTTCGTC ACGCTGCTGT GCATGGCGGG GCTGATGGCG
CTGCTGCTCG ACGCGCCGCG GGCGCGCGAC GTGGCGTGGC GGGGCTGGTG CTTCGGCGTC
GGCCACTTCA CCTTCGGCAA CAACTGGATC GCCACCGCCT TCACCTTCCA GGACGCGATG
CCGCATTGGC TGGGGGGCAT CGCCGTCTTC CTGCTCGCGC TCTACCTCGC GGTCTTCCCG
ATGCTCGCCG GGCTCGGCGC CTGGGCGCTC AACCGGCTGC CGCGGCTGGC GCAGGCGCGG
CGCAATCGGA TCGAGCGCGA CCAGCGGCTG AGCAAGCTCA AGGGCCTGAT CCCCGCCGGA
ATGGAGCCGC AGGCGGCGAC GGCGCCGGTC GCGGCGCCCA GCCCCTTCGC CTTCATCCCG
CTGTTCGCCG GCTGCTGGAT CGCCGCCGAA TATCTGCGCA GCATCGCCTT CACCGGTTTC
GCCTGGAACC CGCTCGGCGC GGTGATGGTC GCGCCAGGCA CAGCCGAGCC GGCCTGGATC
GGCCTCACCC GGCTGGTCGG CACCTACGGC CTGTCGGGCT GGGTGGTGCT GCTGTCGGGC
ATCTGGCTGC TCGCCGTGCT GCCGGGCACG AAGCGCCAGC GCTGGCAGCG GGTCGGCGTG
GCGCTGCTCG TCGCGATGCT CGCCCAGATC CTGTCGGCCT GGCTGCTGCG CCCGCCGCCG
CCGCGCGCCG GGCCACGCAT CCTGGTCGTC CAGCCGAACA TCAACCAGAA CGAGAAATGG
GACCCGAAGC TCCAGCTCGC CAATTTCCGC CGGCTGAGCG AGCTGAGCGG CAAGCCCGGC
CCACAGCCGC GGCTGATCCT CTGGCCCGAG GCGGCGACCG CGGACTTCCT CGAGCTCGAC
CCTCCGGCGC GGTCGCGGAT CGCCGGCCTG CTCGGGCCCA GGGACAAGGT CCTGCTCGGC
GGCGACGCGT TGATCTTCGA CAAGGCGGGC GAGCTGGCCG GCGCGCACAA CAGCCTGTTC
GCGCTCGACG CGCGCGGCGA CATCCTCGGC CGCTACGACA AGGCGCATCT CGTCCCCTAT
GGCGAATATC TGCCGGCGCG CACGATCCTG TCGGCGATCG GCCTGTCGCG ACTGGTGCCC
GGCGACGTCG ATTTCTGGTC GGGGCCCGGT CCGGCGACGA TGACGGTGCC CGGCTTCGGC
AAGGCCGGCA TCCAGATCTG CTACGAGATC ATCTTCTCGG GCCAGGTCGT CGACGCGCGC
AACCGTCCCG ATTTCCTGTT CAATCCCTCG AACGACGCCT GGTTCGGCCG CTGGGGCCCG
CCGCAGCACC TCGCCCAGGC GCGGCTGCGC GCCGTGGAGG AGGGGCTTCC CGTGATCCGC
TCGACGCCGA CCGGCATCTC GGCGGTGGTC GATGCCGACG GGCGGCTGCT CCACAGCCTT
CCCTGGCACC AGGCGGGCGC GATCGACGCG GTGCTGCCGC CGCCGCGCCC GGCGACGCCG
TTCGCGCGCT TCGGCAACCT GCTGCCGCTG CTGTTCGCGG CGTTGCTGGT CGCGGGTGGA
ATTGCCATCG CCTTCAAGCG CCGCTAA
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| Protein sequence | MGCQADPSGI FSPIGERASS RRCGGRDMGE RPCGSSWVMR KLIPFKYPAI AFGLGLASAL
GFAPLNWWFV TLLCMAGLMA LLLDAPRARD VAWRGWCFGV GHFTFGNNWI ATAFTFQDAM
PHWLGGIAVF LLALYLAVFP MLAGLGAWAL NRLPRLAQAR RNRIERDQRL SKLKGLIPAG
MEPQAATAPV AAPSPFAFIP LFAGCWIAAE YLRSIAFTGF AWNPLGAVMV APGTAEPAWI
GLTRLVGTYG LSGWVVLLSG IWLLAVLPGT KRQRWQRVGV ALLVAMLAQI LSAWLLRPPP
PRAGPRILVV QPNINQNEKW DPKLQLANFR RLSELSGKPG PQPRLILWPE AATADFLELD
PPARSRIAGL LGPRDKVLLG GDALIFDKAG ELAGAHNSLF ALDARGDILG RYDKAHLVPY
GEYLPARTIL SAIGLSRLVP GDVDFWSGPG PATMTVPGFG KAGIQICYEI IFSGQVVDAR
NRPDFLFNPS NDAWFGRWGP PQHLAQARLR AVEEGLPVIR STPTGISAVV DADGRLLHSL
PWHQAGAIDA VLPPPRPATP FARFGNLLPL LFAALLVAGG IAIAFKRR
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