Gene Swit_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3373 
Symbol 
ID5200340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3700655 
End bp3701863 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID640582919 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_001263857 
Protein GI148556275 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.304144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA ATTATCTCTT CACGTCGGAA AGCGTGTCCG AAGGTCATCC GGACAAGGTC 
GCGGATCAGA TCTCGGATGC GATCGTGGAC CTGTTCCTGT CGAAGGACCC GGAGGCGCGG
ATCGCCTGCG AGACGCTGAC GACCACCCAG CTCGTGGTGC TGGCGGGCGA GATCCGCTGC
AAGGGCGTGT ACGAGGACGG CGCCTGGGCG CCGGGCGCCG AGGAGGAGAT CGAGCGGACG
GTGCGCGAGA CCGTCAAGGC GATCGGCTAT GAGCAGGACG GCTTCCACTG GCAGACCTTC
CGCTTCGAGA ACAACCTGCA CGGCCAGTCG GCGCACATCG CCCAGGGCGT GGACGCGAGC
GGCAACAAGG ACGAGGGCGC CGGCGACCAG GGCATCATGT TCGGCTTCGC CTGCGACGAG
ACGCCCGACC TGATGCCGGC GACGCTCTAT TACAGCCACA AGATCCTCGA GACGATGGCC
GCCGACCGCC ATTCGGGCGC GGCCCCCTTC CTCGAGCCCG ACACCAAGAG CCAGGTGACG
CTGCGCTTCG ATGGCGGCAA GCCCGTCGCG GCGACCGCGA TCGTCGTCTC GACCCAGCAT
GGCAAGGGCT ATGACGAGGG CGCGAAGGAG GCCGAACTCA AGGCCTATGT GAAGAAGGTG
GTGGCCGGCG TGCTGCCGGC CGATCTGCTC TCCGACCAGA CCGTCTACCA CATCAACCCG
ACCGGCAGCT TCGAGATCGG CGGTCCCGAC GGCGACGCCG GCCTGACCGG CCGCAAGATC
ATCGTCGACA CCTATGGCGG CGCGGCGCCG CATGGCGGCG GCGCCTTCTC GGGCAAGGAC
CCGACCAAGG TCGACCGCTC GGCGGCCTAT GTCACCCGCT ATCTGGCGAA GAACATCGTC
GCCGCCGGCC TCGCCCGGCG CTGCACGATC CAGCTCGCTT ATGCGATCGG CGTGTCGGAG
CCGCTGTCGC TCTATGTCGA CACCCACGGC ACCGGCACCG TTGCCGACGA CAAGATCGAG
GCGGCGATCC AGGGCATCAA GGAACTGGGC GGCCTCACCC CGCGCGGCAT CCGCACCCAT
CTCGGCCTCA ACAAGCCGAT CTATCGCAAG ACCGCGGCCT ATGGCCATTT CGGCCGCAAG
GCCGAGGGCG ATCACTTCCC CTGGGAGCGC ACCGACCTCG TCGACAAGCT CAAGGCCGCG
CTGGCCTGA
 
Protein sequence
MRSNYLFTSE SVSEGHPDKV ADQISDAIVD LFLSKDPEAR IACETLTTTQ LVVLAGEIRC 
KGVYEDGAWA PGAEEEIERT VRETVKAIGY EQDGFHWQTF RFENNLHGQS AHIAQGVDAS
GNKDEGAGDQ GIMFGFACDE TPDLMPATLY YSHKILETMA ADRHSGAAPF LEPDTKSQVT
LRFDGGKPVA ATAIVVSTQH GKGYDEGAKE AELKAYVKKV VAGVLPADLL SDQTVYHINP
TGSFEIGGPD GDAGLTGRKI IVDTYGGAAP HGGGAFSGKD PTKVDRSAAY VTRYLAKNIV
AAGLARRCTI QLAYAIGVSE PLSLYVDTHG TGTVADDKIE AAIQGIKELG GLTPRGIRTH
LGLNKPIYRK TAAYGHFGRK AEGDHFPWER TDLVDKLKAA LA