| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3371 |
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| Symbol | trmB |
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| ID | 5200338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3699247 |
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| End bp | 3699939 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582917 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001263855 |
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| Protein GI | 148556273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGACC CTTTGACGAT CCGCCGCCTC TATGGCCGGC GCCAGGGCCA CAAGCTGCGC
CAGGGCCAGG CCGAGCTGGT CGAGCGGCTG CTGCCCGAGA TATCGGTGCC CGAGACGGGC
GAGCTGACCG CGTCCACGCT GTTCGGCGAC GCCGAGGGGC GGGGCCGCCC GCTCGAGCTG
GAGATCGGCT TCGGCAAGGG CGAGCATATG GCGTGGCAGG CGAGCCAGCG GCCCGGCCAC
GGCTTCATCG GCTGCGAGCC CTTCCTCGAC GGCGTGGTCG GCGCGCTGAT GAAGGTCGAC
GAGCTGGGCC TCGCCAATGT CCGCATCCAC ATGGGCGACG CGATCGAGGT GCTCGAACGC
CTGCCCGACG CCTCGCTCGA CCGTGCCTGG CTGCTCCACC CCGATCCCTG GCCCAAGGCG
CGCCACGCCA AGCGCCGCTT CATGAACGCC GGCCCGATCG GCCTGATCGC GCGCAAGATG
AAGCCGGGCG GCGAGTTCCG CTTCGGCACC GACCATCCGG TCTATGTCCG CTGGGCGATG
ATGGTGATGG GCCAGTCCCC CGACTTCGAA TGGCTGGGCG AACACCCCTC CGACTTCCTC
GTCCGCCCCG ACGACTGGCC CGAAACCCGC TACGAAGCCA AGGCCCGGGC GAAGGGGCAC
GAGGTCTGGT ATTTTCGGTA CAGGCGCAAG TAG
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| Protein sequence | MNDPLTIRRL YGRRQGHKLR QGQAELVERL LPEISVPETG ELTASTLFGD AEGRGRPLEL
EIGFGKGEHM AWQASQRPGH GFIGCEPFLD GVVGALMKVD ELGLANVRIH MGDAIEVLER
LPDASLDRAW LLHPDPWPKA RHAKRRFMNA GPIGLIARKM KPGGEFRFGT DHPVYVRWAM
MVMGQSPDFE WLGEHPSDFL VRPDDWPETR YEAKARAKGH EVWYFRYRRK
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