Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3318 |
Symbol | |
ID | 5199839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3651213 |
End bp | 3652151 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582863 |
Product | hypothetical protein |
Protein accession | YP_001263802 |
Protein GI | 148556220 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000206651 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGCGATC TGCTCGAACA GGCGCGCGCC TGGGTCGGAC GGCCGGCCAG CCCGCCGGCG ACGGCGCGCG ACCCGGTCAA CCTGCCGATG ATCCGCCGCT GGTGCGAGGC GATGGGGGAG ACCAACCCCG TCTATCTCGA CGAGGTGGCC GCGCGCGCCG CCGGCCATCC CGGCATCGTC GCGCCGCCGG CGATGCTCGA CGTCTGGGCG ATGGCGCCCT ACCGCCCCGG CGGCCGCACC GCCGAGGAGG GGATGGCGGT GCTGAGCCTG TTCGACGATG CGGGCTATAC CGGCGTCGTC GCGACCAACG TCCGCCAGGA CTATGGCCGC TACCTGACCT TGGGCGAGGT CGTCACCTCG ACGCCGATCG TCGCCGACGT GTCGGACGAG AAGCGGACCG CGCTCGGCAT CGGCCATTTC GTCACGCTCG CCTACGACTT CACCGTCGCC GGCGAGCCGG TCGGGCGGAT GACCTTCCGG GTGCTGAAGT TCAAGCCGAA CCTGGCCCAG CCCCAGTCCC GGCCGGCCGA ACCGGCGGCG GAGACGAAGG TCTGGCCGCA TCCGCGCCCG GCGATCACCC ATGACAACGC CTTCTTCTGG GAAGGGGTGA ACCGGCGCAA GCTGCTGTTC CAGTCGTGCG AGGGGCGGCT GCGCCATCCG CCCGGGCCGA TGGACCCGCT GACCGGATCG CTCGATTTCG AGATCGTCGA GGCGAGCGGG CGGGGGACGA TCCACAGCTT CGTCGTCATG CACCAGCCGC GCCTGCCCGG CTTCGACTAT CCGCTGCCGG TCGTGCTGGT CGAGCTGGAG GAAGGCGTCC GCATCGTCGC CAACATGATC GACGCCGCCG CCGAGGCGAT CGAGATCGGC CGCGCCGTCG TCGCCGACTT CGTCGAGGTC GAGCCCGGCT ATCTCCTCCC CGCCTTCCGC TTCGCCTGA
|
Protein sequence | MGDLLEQARA WVGRPASPPA TARDPVNLPM IRRWCEAMGE TNPVYLDEVA ARAAGHPGIV APPAMLDVWA MAPYRPGGRT AEEGMAVLSL FDDAGYTGVV ATNVRQDYGR YLTLGEVVTS TPIVADVSDE KRTALGIGHF VTLAYDFTVA GEPVGRMTFR VLKFKPNLAQ PQSRPAEPAA ETKVWPHPRP AITHDNAFFW EGVNRRKLLF QSCEGRLRHP PGPMDPLTGS LDFEIVEASG RGTIHSFVVM HQPRLPGFDY PLPVVLVELE EGVRIVANMI DAAAEAIEIG RAVVADFVEV EPGYLLPAFR FA
|
| |