Gene Swit_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3318 
Symbol 
ID5199839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3651213 
End bp3652151 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID640582863 
Producthypothetical protein 
Protein accessionYP_001263802 
Protein GI148556220 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000206651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGATC TGCTCGAACA GGCGCGCGCC TGGGTCGGAC GGCCGGCCAG CCCGCCGGCG 
ACGGCGCGCG ACCCGGTCAA CCTGCCGATG ATCCGCCGCT GGTGCGAGGC GATGGGGGAG
ACCAACCCCG TCTATCTCGA CGAGGTGGCC GCGCGCGCCG CCGGCCATCC CGGCATCGTC
GCGCCGCCGG CGATGCTCGA CGTCTGGGCG ATGGCGCCCT ACCGCCCCGG CGGCCGCACC
GCCGAGGAGG GGATGGCGGT GCTGAGCCTG TTCGACGATG CGGGCTATAC CGGCGTCGTC
GCGACCAACG TCCGCCAGGA CTATGGCCGC TACCTGACCT TGGGCGAGGT CGTCACCTCG
ACGCCGATCG TCGCCGACGT GTCGGACGAG AAGCGGACCG CGCTCGGCAT CGGCCATTTC
GTCACGCTCG CCTACGACTT CACCGTCGCC GGCGAGCCGG TCGGGCGGAT GACCTTCCGG
GTGCTGAAGT TCAAGCCGAA CCTGGCCCAG CCCCAGTCCC GGCCGGCCGA ACCGGCGGCG
GAGACGAAGG TCTGGCCGCA TCCGCGCCCG GCGATCACCC ATGACAACGC CTTCTTCTGG
GAAGGGGTGA ACCGGCGCAA GCTGCTGTTC CAGTCGTGCG AGGGGCGGCT GCGCCATCCG
CCCGGGCCGA TGGACCCGCT GACCGGATCG CTCGATTTCG AGATCGTCGA GGCGAGCGGG
CGGGGGACGA TCCACAGCTT CGTCGTCATG CACCAGCCGC GCCTGCCCGG CTTCGACTAT
CCGCTGCCGG TCGTGCTGGT CGAGCTGGAG GAAGGCGTCC GCATCGTCGC CAACATGATC
GACGCCGCCG CCGAGGCGAT CGAGATCGGC CGCGCCGTCG TCGCCGACTT CGTCGAGGTC
GAGCCCGGCT ATCTCCTCCC CGCCTTCCGC TTCGCCTGA
 
Protein sequence
MGDLLEQARA WVGRPASPPA TARDPVNLPM IRRWCEAMGE TNPVYLDEVA ARAAGHPGIV 
APPAMLDVWA MAPYRPGGRT AEEGMAVLSL FDDAGYTGVV ATNVRQDYGR YLTLGEVVTS
TPIVADVSDE KRTALGIGHF VTLAYDFTVA GEPVGRMTFR VLKFKPNLAQ PQSRPAEPAA
ETKVWPHPRP AITHDNAFFW EGVNRRKLLF QSCEGRLRHP PGPMDPLTGS LDFEIVEASG
RGTIHSFVVM HQPRLPGFDY PLPVVLVELE EGVRIVANMI DAAAEAIEIG RAVVADFVEV
EPGYLLPAFR FA