| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3312 |
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| Symbol | |
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| ID | 5196321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3641267 |
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| End bp | 3643621 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582857 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263796 |
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| Protein GI | 148556214 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000345148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000067501 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTCG CATTCCAGCT CGCGCGCGCC TCCACCATCG CGCTCGCGAT CGCCACCACC
GCCCCATCCT TCGCGCAGGC GACGCCGTCG CAGGCGGCCG TCCCGGCCGC GGCCGAGGAC
AATAGCGTCG CCGGCGTCGA GGAGATCGTC GTCACCGCGG AGCGCCGGGC CGAAAACCTG
CAGCGCACCC CGATCGCGAT CACCGCGCTG ACCGCCAACA GCCTCCAGTC GTCGGGCATC
ACCGACCTGC GCGGCGTGGT GCAGGCGGCG CCCAGCCTCT ATTTCGCGCC CTATCCCAGC
TCGACCACCA CGCTGGTCCT GTTCATGCGC GGCCAGGGCA TCGGCGATCC GAACATCATC
ACCAAGGACG GCGGCGTCGG CCTCTATGTC GACGGCATCT ACCAGTCGCG CCCGCAGGCG
TCGGCCTTCG ACCTCGCCGA CGTCGAGCGG GTCGAGGTGC TGCGCGGTCC GCAGGGCACG
CTCTACGGCC GCAACACCAC CGGCGGCGCG GTCAACATCA TCAGCAAGAA GCCGACCGGC
GAGCTCGGCG CGCATGGCCT GCTGTCGCTC GGCAACTACG ACTATCGCCG CGCGCTGGTG
AACCTCGACC TGCCGCAGTT CGGCACCTTC AAGGTCAAGC TGACCGGCCT CTATTCGAAC
CGGGACGGCT GGGCGAACAA CGCCGCCAAC ACCGCGGGCA CGCCCGACGC GCACGATTTC
CAGTCCGACC GCAAATATGC GGTGCGCGGC GCGGTCCGCT GGGAACCGAC CGACGGCATC
ACCGTCGACT ATTCGGGCGA CTATAGCGAC CAGCGCACCA CGCCGGTCCG CTACGTCACC
GAGAACGCCT TCGCGCCCTT CCTCTTCCCC GGCTACACCG CCGACCCGGA GACCGCCTAT
CGCCCGGTCT ACCTGCCCTA CAGCCATGTG AAGTCGGACG GCCACACGCT GATCGGCGAA
TGGCGGGCGA GCGACGCGCT GACGCTGCGT TCGCTGAGCA GCTACCGGCA CATCAAGGTG
CGGACCTACC AGGACTATAC CGAGGCCTTC CTGGCGCCCT TCTTCGCGTT CGACCAGGTC
GGCTCGAAGA CCTACACCCA GGAATTCCAG GCGGTCGGCA CCATCGCCGA CCAGTTCAAA
TATGTCGTCG GCATCTATTA TTTCCGCGAG AAGGCCAATC ATTTCGAGAC GGTCGACGTC
GGCACCGGCA CGCCCGGCCA GCAGGTGCTG GTCGATCGCG ACACCAACGC CAAGTCGACC
TCCAAGGCGA TCTTCGGCCA GCTGACCTGG ACCCCGGAGT TCGCCGACGG CAAGTTCGAC
GTGACCGTGG GCGGCCGCTA CACCCGCGAC AAGCGGACCG CCGACCGCAT CCGCACCTCG
AACTTCTTCA TCGGCCAGAC TTCGCCGCTG GTCGCCCGCC GCTTCAACGG CCCGGGCGCG
ACCATCCCGC TGGGATCGGT GGTCGGCGCG ACCGACGTGA AGAACAGCAA GTTCAACCCG
GCGCTGACCC TGTCCTACCG CCCGGTCGAG AACGTCTCGC TCTATGCGAA GGTCGTGACC
GGCTACAAGG CGGGCGGATC GAACGAGGCG TCGCCGACCT TCACCCGCAC CTTCGGGCCG
GAGACGGTCA CCAGCTATGA GGCGGGCATC AAGTCCGACC TGCTCGACCG GCGGCTGCGC
GTGAACCTCG CCGGCTTCAT CGCCAAGTAC AAGGACCTGC AGCTCGACAT CTCGGCCGAC
CCCGCCGACG CGTCGCTGGC CGACACGTTC AACGTCGGCC GCGCGACGGT GAAGGGGCTG
GAGGCCGACC TGACGGCGGT GCCGATCCCC GGCCTGACGC TCAGCGCCAG CTATGCCTAC
ACCACCTCGA AGATCCGCAA CGTGCTGGCC CCGGCCGGCT CGATCTTCGA TCCCGCCGTC
AACCCCGGCT CGCCGGTGCA GGTCGGCGAC AACATCACCG GCTATTTCGT GCTGCCCTTC
ACCCCGAAGA ACAGCGTCCG CCTGTCGGGC GACTGGGTGA TCGGGACGTT CGGCAGCGGC
GACCTCGCCG CGCATGTCGA CTATACGTGG AAGGACAAGG TCTACACCAC CGCCGGCGAC
GGCCCCAGCG TCCCGCTCGG CCGCGACGCG CCGATCAACA AGGCCTATGG CCTGGTCGAC
GCCCGCCTGA GCTACACGAT CGATCGCGGC GGCGGCCGCA ACATCTCGAT CGGGCTGTGG
GGCAAGAACG TGCTCGACAA GCGCTATCCC GGCTTCGTGA TCGGCTCGGG CTCGATCATC
GCCGGCTACC CGAACCAGGC GATCTCCTAC GGCGATCCGG CGACCTACGG GATCGACGTC
GGCTTCTCCT TCTAA
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| Protein sequence | MTVAFQLARA STIALAIATT APSFAQATPS QAAVPAAAED NSVAGVEEIV VTAERRAENL
QRTPIAITAL TANSLQSSGI TDLRGVVQAA PSLYFAPYPS STTTLVLFMR GQGIGDPNII
TKDGGVGLYV DGIYQSRPQA SAFDLADVER VEVLRGPQGT LYGRNTTGGA VNIISKKPTG
ELGAHGLLSL GNYDYRRALV NLDLPQFGTF KVKLTGLYSN RDGWANNAAN TAGTPDAHDF
QSDRKYAVRG AVRWEPTDGI TVDYSGDYSD QRTTPVRYVT ENAFAPFLFP GYTADPETAY
RPVYLPYSHV KSDGHTLIGE WRASDALTLR SLSSYRHIKV RTYQDYTEAF LAPFFAFDQV
GSKTYTQEFQ AVGTIADQFK YVVGIYYFRE KANHFETVDV GTGTPGQQVL VDRDTNAKST
SKAIFGQLTW TPEFADGKFD VTVGGRYTRD KRTADRIRTS NFFIGQTSPL VARRFNGPGA
TIPLGSVVGA TDVKNSKFNP ALTLSYRPVE NVSLYAKVVT GYKAGGSNEA SPTFTRTFGP
ETVTSYEAGI KSDLLDRRLR VNLAGFIAKY KDLQLDISAD PADASLADTF NVGRATVKGL
EADLTAVPIP GLTLSASYAY TTSKIRNVLA PAGSIFDPAV NPGSPVQVGD NITGYFVLPF
TPKNSVRLSG DWVIGTFGSG DLAAHVDYTW KDKVYTTAGD GPSVPLGRDA PINKAYGLVD
ARLSYTIDRG GGRNISIGLW GKNVLDKRYP GFVIGSGSII AGYPNQAISY GDPATYGIDV
GFSF
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