| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3303 |
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| Symbol | |
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| ID | 5198271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3631957 |
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| End bp | 3632715 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582848 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263787 |
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| Protein GI | 148556205 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0379988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGA GCGACATCGA CTTCGACTAT GCCGGGGCGC GGGTGCTGGT CACCGGCGGG
ACCAGCGGGA TCGGCGCGGC GATCGCCGGC GCCTATGCCG ATGCGGGCGC GCAGGTGACG
ATCACCGGCA CGCGCGGCTC GCCCGCCGAT TATGACGAGG ACCTGTCGCG CTTCGACTAT
CGCCAGCTCG ACGTCGAGCG GGGCGAGCAG GTCGACGCGG TGGCGGCGGG CGTCGACCGG
CTCGACATAT TGGTGAACAA TGCCGGGCTC GCGCTCGGCT CGCTCGGCTT CGACGAATGG
GACCCGGCGG TGTTCGAGCG GTCGGTGGCG ATGCACCTGA CCTCGGCCTT CCGCATGGCC
CATGGCTGCC GCGCCGCGCT GGCGCGGAGC GAGCGGCCGG CGGGCGCCTC GATCATCGGC
ATCGCCTCGA TGACCTCCTA TTTCGGCATC GGCATGATCC CGGGCTACGG CTCCGCCAAG
ACCGGCATCC TCGGCCTGAC CCGGGTGCTG GCCGCCGAAT GGGCGTCGCA GCGCATCCGC
GTCAACGCGG TCGCGGCGGG GCTGACCCGC AGCCGGATGA CGGCGGGCGC GTTCGAGGCG
CCCGAATGGA CCGCGCCGAC CCTGCAGCGC ACCCCGCTCG GCCGGCTCGG CGAGCCGAAG
GACATTGCCG GCGCGGTGCT GTTCCTGTCG AGCTCGGCCG CCGCGTGGAT CACCGGGCAG
ATATTGCCGG TCGACGGCGG CTTCACGATC GCCGGATGA
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| Protein sequence | MGWSDIDFDY AGARVLVTGG TSGIGAAIAG AYADAGAQVT ITGTRGSPAD YDEDLSRFDY
RQLDVERGEQ VDAVAAGVDR LDILVNNAGL ALGSLGFDEW DPAVFERSVA MHLTSAFRMA
HGCRAALARS ERPAGASIIG IASMTSYFGI GMIPGYGSAK TGILGLTRVL AAEWASQRIR
VNAVAAGLTR SRMTAGAFEA PEWTAPTLQR TPLGRLGEPK DIAGAVLFLS SSAAAWITGQ
ILPVDGGFTI AG
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