| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3299 |
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| Symbol | |
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| ID | 5196268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3627695 |
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| End bp | 3628345 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582844 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_001263783 |
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| Protein GI | 148556201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0424651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAGG CCGGGGATCG GGCCAGGCGG CCGGGGCCGC GATCGGGCGT GCGCTCGATC
CGGCAGGAGG CGCAGGTCGC GTCCAGCCGG CGCGAGATCG TCGATGCGCT GCGCGACCTG
TTGCGCTCGC GCCGGTTCGA CGATCTGTCG GTCGAGGACA TATTGGCCGT GTCCGGCGTC
AGCCGCGCGA CCTTCTATCG CCACTTCAAG TCGCGGCGCG ACGTCGTCGT CTCGATGTAC
GAGGCGACGA TGGAGCGGGC GATCCCGCAC TTCCGCCTGC TCGCCAGGGT CGCGGCGGGC
CGGCTGCCGG CGCTCCGCTG GGCGCGCGGA GCGGTCGAGT TCTACCGCGC CGAGGGGCAG
ATATCGGTGC TGATCCACGG CCTCGCCGCG ACCGACGAGG CTTTCCACGA GAAGCTCCGC
CAGGATCGCC AGATGCTGAT CCGGCTGCTG GCGCCCGATG TCCCCGCCTT CGCGGCGGCG
CTGGGCGAGG GCGCCGCCGC GCGCCGGCAA AGGGCGCGCG CCGACATCTT CTTCATGATG
CTCGACCGGA TCAGCGCCGA GATCACCCTG TTCGCCGCGC TGGCCGACAT GTCGGAATAT
GAGGCGGTGC TGGCCGAGCG GATCGACGCC TTCCTCCACG GATCGGCCTG A
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| Protein sequence | MDQAGDRARR PGPRSGVRSI RQEAQVASSR REIVDALRDL LRSRRFDDLS VEDILAVSGV
SRATFYRHFK SRRDVVVSMY EATMERAIPH FRLLARVAAG RLPALRWARG AVEFYRAEGQ
ISVLIHGLAA TDEAFHEKLR QDRQMLIRLL APDVPAFAAA LGEGAAARRQ RARADIFFMM
LDRISAEITL FAALADMSEY EAVLAERIDA FLHGSA
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