Gene Swit_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3293 
Symbol 
ID5198547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3623117 
End bp3623587 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID640582838 
Producthypothetical protein 
Protein accessionYP_001263777 
Protein GI148556195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGTC TGGAGGAACG CATCGCGCGG CTGGAGGCGG AGAGCGAGAT CCGCAAGCTC 
AAGGCGCGCT ATCTCAACGC CTGCGACGCC AAGGACGTGG AGGCGATCCG CGCCTGCTTC
ACCCCCGACG CCGATCTCGA CTATCGGCCG GTAGGCAAAT TCGGACCCGA CGGGCTGATC
GAGGCCTTCA CCCGGATCGC GGTCGAAAGC CCGATCGTCG ATGTCCACCA GATCCACAAC
GGCGAGATCG AGATCGTCGA CGCCGACCGC GCCACCGCGC GCTGGAGCCT GGGCTTCTCG
ACCTATGATC CGCGCACCGG CGGCTTCCGG CTGATCGGCA GCTTCTATTA CGACGAATAT
GTCCGCACGG CCGACGGCTG GCGGGTGTCG AAGTCGCGCC ACGAGCCGCG CACCATCGTC
GACGGCACGA TCGGCGAGGG CGGCGTCACC GCCCGGTCGA TACTGGGGTG A
 
Protein sequence
MASLEERIAR LEAESEIRKL KARYLNACDA KDVEAIRACF TPDADLDYRP VGKFGPDGLI 
EAFTRIAVES PIVDVHQIHN GEIEIVDADR ATARWSLGFS TYDPRTGGFR LIGSFYYDEY
VRTADGWRVS KSRHEPRTIV DGTIGEGGVT ARSILG