Gene Swit_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3272 
Symbol 
ID5197109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3602871 
End bp3603671 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID640582817 
Productenoyl-CoA hydratase 
Protein accessionYP_001263756 
Protein GI148556174 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0614086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGATT TCCTTCTGGT CGAACGCGAC GGCGCGGTGG TCACCGCCAC GCTCAACCGT 
CCCGACGAGC GCAACGCCAT CTCCGAACAG GCGCATATCG AGGCGATCGA GCGCTTCTGC
GCGGCGATGA CCGCCGATCG CGGCATCAAG GCGGTGGTGC TGACCGGCGC CGGCACCGCC
TTCTGCGCGG GCGGCAACGT GAAGAGCATG CGCGATCGCG CGGGCATGTT CGCAGGCTCC
CCGCTCGACC TGCGCAACCA GTATCGCGCC GGCATCCAGC GCATCCCGAT GGCGCTCTAC
GAACTGGAGG TGCCGGTGAT CGCGGCGGTC AACGGCCCGG CGATCGGCGC CGGCCTCGAT
CTCGCCTGCA TGTGCGACAT CCGCATCGCG GCGGAGGGGG CGATCTTCGC CGAGAGCTTC
GTGAAGCTCG GCATCGTTCC GGGCGACGGC GGCGCCTGGC TGCTGCCGCG CGTGATCGGC
ATGGCGCGCG CCTCGCTGAT GACGCTGACC GGCGACGCGA TCGATGCTGC CCGCGCGCTC
GACTACGGGC TGGTGAGCGA GATCACGCCG CCCGACCGGC TGCTGGCCCG CGCCCGCGAG
ATCGCCGCCC GCGTCGCCGC CAACCCCGGC CACGCGACCC GCCTCGCCAA GCGCCTGCTG
CGCGAGGGAC AGGACATGAA GCTCGGCCCG CTGCTCGAAC TCTCGGCCGC CTATCAGGCG
CTCGCCCACC ACACGGCGGA CCATGAGGAA GCCGTCGCCG CCTTCCTCGA AAAACGCCCG
CCGGCCTTCA CCGACCGTTA G
 
Protein sequence
MDDFLLVERD GAVVTATLNR PDERNAISEQ AHIEAIERFC AAMTADRGIK AVVLTGAGTA 
FCAGGNVKSM RDRAGMFAGS PLDLRNQYRA GIQRIPMALY ELEVPVIAAV NGPAIGAGLD
LACMCDIRIA AEGAIFAESF VKLGIVPGDG GAWLLPRVIG MARASLMTLT GDAIDAARAL
DYGLVSEITP PDRLLARARE IAARVAANPG HATRLAKRLL REGQDMKLGP LLELSAAYQA
LAHHTADHEE AVAAFLEKRP PAFTDR