| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3263 |
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| Symbol | |
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| ID | 5197145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3591793 |
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| End bp | 3594375 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582808 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263747 |
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| Protein GI | 148556165 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.327376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00174671 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTACC GTCAGCTTCT CATCGTCTCC AGCTCGCTGC TCGCGCTGGT GCCGGCAGCG
GCCTGGGCGC AGGCCGCCGA AACCACGTCC GAAGCGGCGG GCGGCATCGA GGAGATCGTC
GTCACCGCCC AGAAGCGCGC CCAGAACGTG CAGGACGTGC CGATCGCGAT CTCGGCCTTC
ACCGCCAACG CGCTCAAGGA GCGCGCGGTG GCCGACGTCG CCAGCCTGTC GAACATCGCG
CCGAACGTGA CGCTCGACGC CGGCACGCCC TTCTCGGGAT CGAGCTCGGT GCTGTCGGCC
TATATCCGCG GCATCGGCCA GAACGACTTC GCGGCGAACC TCGATCCGGG CGTCGGCGTC
TATCTCGACG GCATCTACCT GGCGCGCACG GTCGGCGCCA ATCTCGACCT GCCCGACGTC
GAGCGGATCG AGGTGCTGAA GGGGCCGCAG GGGACTCTGT TCGGCCGCAA CACGATCGGC
GGCGCGATCT CGGTCGTCAC CCGCGATCCG GGCCGCGAAT TCTCGTTCCG CGGCGACATC
ACCACCGGCC GCTTCAACCG GCTCGACATC AATGCCAGCG TCGACCTGCC GATCACCGAC
ACGGTCGGGC TGTCGCTGAC CGGATCGTCG CGCAAGCGCG ACGGCTATCT GAAGCGCATC
CCCTTCCCCA ACGCCGGCAA TTTCGCGACC GATCCCAATG CGGCGTTCCG CTCGAACGGC
TATGACAGTT CCTCGAAGGA GGGCGGCCAG AGCGAATGGT CGCTGCGCGG CAAGCTCAAA
TGGGAGGCGT CCGAGCGGCT GACCGTCCGC ATCTCGGGCG ACTATCTCCG CCAGGACCAG
CAGGGCACCG CCAACAAGCT GCTCGCGACC ACCGAGGACC AGCCCTATGT CTTCGCGCCG
ACCGCCGATC GCGCGCTGGT CATCCCCGGG CTCGGCGCGA CGGCGCTCTA TGACGGCGCG
TCGGGGCTCG CGCCCAACGG CTTCAACTTC GCCGGCCTCT ACAATTTCTG CATCGGATCG
ACCCCGGGGG AGATCGCCGC GCGCAACGCG ACCGCGCTGT GCGGCGCGCG CGGCACCCCG
CTCAATCCGG GGCAGGTGAT CGGCGGGCTC GCCGGCGTCA ACGTCGACGC CGATCCGTCG
AACGACCGGC TGCCCTTCGA CGGACGCTAC CTGCTCGCCG ACAAGGACAA GAGCTATGCG
ACCGGGCTGA ACTTCTCGCG GATGCGGGTC TGGGGCCTGT CGATGACGCT CGACTATGAG
CTGTCCGACG CGATGAGCAT CAAGTCGATC ACCGGCTATC GCCGGCTGCG CTGGGAGACC
GGGCTCGACG CCGACGGCTC GCCGGTGCGG GCGCTCGAAT TCTCCTTCTC GCTCCGGAAC
TGGCAGTTCA GCCAGGAGCT TCAGCTCACC GGCCACGCCT TCGACGAGAA GCTGAAATAT
GTCGTCGGCG GCTATTACTT CAAGGAACGC AGCTTCCTGA GCGACTATGT GACCTTCGAC
CAGGGGTTGT TGCAGATCTA CGGCCCGAAC CTGCTCCACA CCAAGAACTA CGCCTTCTTC
GGGCAGGTCG ACTATGAGCT GTCGCCGCTG ATCTCCTTCA CGCTCGGCGG CCGCTACACG
AAGGAGAGCA AGGACTTCAA CGGCGGCCAG AGCGACCTGA ACGGCTTCAA CTACAAGCTG
TTCAACTGCC CGGTCTATGG CGATCCCTGC ACCACCGCGC TGGGCTTCCC GTCGCCGTCC
GAGCCGCTGC GCTACTATGT GCCGCAGACC CAGTATCGCA AGTTCAACAA TTTCGCGCCG
AAGCTGGGCG TGCAGCTCCA CCCGACCGAC GACATCATGG TCTACGGCTC CTGGTCGCGC
GGCTACAAGA CCGGCGGCTG GACGACGCGC CTGTCCAACC CGCTGCCCAC CGCCGCCAGC
TTCTCGCCCG AAAAGGCGGA GAGCTTCGAA CTGGGCGTGA AGTCCGAATT CTTCGCCCGA
AGGCTCCAGC TCAACGCGGC GGTGTTCACC ACCAGATATG ACGGCATCCA GCTCAACTTC
CAGCAGGGCG TCTCGCCGAC CATCCAGAAT GCCGGCGACG CGCGGATCAA GGGCTTCGAG
GTCGAGCTGG TCGCCGCTCC TGCCGCCGGC CTGACGATCA ACGCCTCGGT CGGCTACAGC
GACGCCTATT ACACCAGCGT GCTGCCGCAG GCGCAGGTCG CGCCCAATCC GCTGCAGGCG
GGCGTCTTCC CCGGCGCGCC CCTGCCCAAG ACGCCCAAGT GGAAGTTCAA CGTCAGCCCG
CGCTACGAAT ATCTGCTGCC CAACGACGGC GCCCTGATCG CGCTGGTCGA CTATACCCGC
ACCAGCAAGG TGTGGAACGA CAGCGAGCGC GCCTATGCGC TGCTGCGGCC GTCGACCGAC
CAGCTCAACG CCAGCCTGTC CTACCGCGCG CCGGGCAATC GCTGGACCTT CACCGTCGGC
GGCGTGAACC TGACCAACGA CCGCTATCTG GTCAGCGGCG GCAACCAGAC CGCGGCGGGC
CTGCTGTTCG GCACCTACAA CCGGCCGACC GAATGGTACG CCCGGGTCGG CGTCAAGTTC
TGA
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| Protein sequence | MPYRQLLIVS SSLLALVPAA AWAQAAETTS EAAGGIEEIV VTAQKRAQNV QDVPIAISAF
TANALKERAV ADVASLSNIA PNVTLDAGTP FSGSSSVLSA YIRGIGQNDF AANLDPGVGV
YLDGIYLART VGANLDLPDV ERIEVLKGPQ GTLFGRNTIG GAISVVTRDP GREFSFRGDI
TTGRFNRLDI NASVDLPITD TVGLSLTGSS RKRDGYLKRI PFPNAGNFAT DPNAAFRSNG
YDSSSKEGGQ SEWSLRGKLK WEASERLTVR ISGDYLRQDQ QGTANKLLAT TEDQPYVFAP
TADRALVIPG LGATALYDGA SGLAPNGFNF AGLYNFCIGS TPGEIAARNA TALCGARGTP
LNPGQVIGGL AGVNVDADPS NDRLPFDGRY LLADKDKSYA TGLNFSRMRV WGLSMTLDYE
LSDAMSIKSI TGYRRLRWET GLDADGSPVR ALEFSFSLRN WQFSQELQLT GHAFDEKLKY
VVGGYYFKER SFLSDYVTFD QGLLQIYGPN LLHTKNYAFF GQVDYELSPL ISFTLGGRYT
KESKDFNGGQ SDLNGFNYKL FNCPVYGDPC TTALGFPSPS EPLRYYVPQT QYRKFNNFAP
KLGVQLHPTD DIMVYGSWSR GYKTGGWTTR LSNPLPTAAS FSPEKAESFE LGVKSEFFAR
RLQLNAAVFT TRYDGIQLNF QQGVSPTIQN AGDARIKGFE VELVAAPAAG LTINASVGYS
DAYYTSVLPQ AQVAPNPLQA GVFPGAPLPK TPKWKFNVSP RYEYLLPNDG ALIALVDYTR
TSKVWNDSER AYALLRPSTD QLNASLSYRA PGNRWTFTVG GVNLTNDRYL VSGGNQTAAG
LLFGTYNRPT EWYARVGVKF
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