Gene Swit_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3255 
Symbol 
ID5197047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3583703 
End bp3584077 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content71% 
IMG OID640582800 
Productcytochrome c, class I 
Protein accessionYP_001263739 
Protein GI148556157 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000474848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000193536 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTTCCA TCGCCGTCAT GGGGATGTTG CTGATCGGGC TGGCCGCGCT GCCGGCCCCC 
GCCGTCGCGG CGGGCGACGC CGCGAAGGGC GCGACCCTGT TCAAGCGCTG CGTCGCCTGC
CACACGGTCG ATCCCGGCAA GAAGGCCGGC ATGGGGCCCA ACCTGGCCGG GGTCGTCGGG
CGCAAGGCGG GGGCGACCAG CTTCCCCTAC TCGCCCGCGA TGAAGGCCGC CGCGATCAGC
TGGACGCCCG ACAAGCTCGA CACCTTCCTG ACCCGCCCCG CCGCCATGAT CAAGGGATCG
CGCATGGCCT TCGCGGGCCT GCCGAACGCG CAGGACCGGG CGGACGTGAT CGCTTACCTT
GCCACCCGGA AATAG
 
Protein sequence
MRSIAVMGML LIGLAALPAP AVAAGDAAKG ATLFKRCVAC HTVDPGKKAG MGPNLAGVVG 
RKAGATSFPY SPAMKAAAIS WTPDKLDTFL TRPAAMIKGS RMAFAGLPNA QDRADVIAYL
ATRK