| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3237 |
|---|
| Symbol | |
|---|
| ID | 5196814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3560740 |
|---|
| End bp | 3561795 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640582782 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001263721 |
|---|
| Protein GI | 148556139 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.1011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATA TCGCCAAGCC GCAATTCCAC CATCCGTCGC TCAAGCACAA TGCGCTGGGC
TTCACCCGGC GCGACTATGA GGGGAAGGTG TCGACGCTCT GCGCCGGCTG CGGGCACGAC
TCGATCAGCG CCGCGATCGT CCAGGCCTGC TTCGAGATCG ACCTGGAGCC GCACCGCCTC
GCCAAGCTGT CGGGGATCGG CTGCTCGTCG AAGACGCCCG ACTATTTCCT CGGCGCGAGC
CACGGCTTCA ACACCGTCCA CGGCCGCATG CCGTCGGTGC TGACCGGCGC CAACCTCGCC
AATCGCTCGC TGATCTACCT GGGGGTGTCG GGCGACGGCG ACAGCGCCTC GATCGGCCTC
GGCCAGTTCG CCCATGCGAT GCGGCGCGGG GTCAATATGA CCTACATCGT CGAGAATAAC
GGCGTCTATG GCCTCACCAA GGGGCAGTTC TCGGCGACCG CCGACAAGGG CAGCAAGTCG
AAGAAGGGCG TCGTCAACTC GGACAGCGGG ATCGACATGG TCGGCCTCGC GCTCCAGCTC
GGCGCGACCT TCGTCGCGCG CAGCTTCTCG GGCGACAAGG ACCAGCTCGT GCCGCTGATC
AAGGCGGCGC TGACCCACAA GGGCGCGGCG TTCATCGACG TGCTCAGCCC CTGCATCGCC
TTCAACAACC ACAAGGGATC GACCAAGAGC TTCGACTGGG TGCGCGAGCA TAACGAGGCG
GTGAACCGGC TCGACGTGCT GATGGCGCGG ATGGCGGTGA CCGCCAGCTA CGAGCCCGGA
TCGCTGACCG AGGTGACCCA GCATGACGGA TCGGTGCTGC TGCTCCGCAA GGTCGCCGAG
GATTACGACC CGACCGATCA TGCCGGCGCG ATCTCCTATC TCCAGCATGC CCATGCGGCG
GGGGAGATCG TCACCGGCCT GCTCTATGTC GACCCCGAGG CGGAGGAGCT GCACGACGCG
CTCGGCACGG TGAAGCAGCC GCTCAACGCG CTGCCGGACG AGGAACTGGT GCCGCCGGTG
GCGGCGCTCG ACAAGATCAA CGCGGGGCTG CGCTAG
|
|---|
| Protein sequence | MTYIAKPQFH HPSLKHNALG FTRRDYEGKV STLCAGCGHD SISAAIVQAC FEIDLEPHRL
AKLSGIGCSS KTPDYFLGAS HGFNTVHGRM PSVLTGANLA NRSLIYLGVS GDGDSASIGL
GQFAHAMRRG VNMTYIVENN GVYGLTKGQF SATADKGSKS KKGVVNSDSG IDMVGLALQL
GATFVARSFS GDKDQLVPLI KAALTHKGAA FIDVLSPCIA FNNHKGSTKS FDWVREHNEA
VNRLDVLMAR MAVTASYEPG SLTEVTQHDG SVLLLRKVAE DYDPTDHAGA ISYLQHAHAA
GEIVTGLLYV DPEAEELHDA LGTVKQPLNA LPDEELVPPV AALDKINAGL R
|
|---|
| |