Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3125 |
Symbol | |
ID | 5197869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3433716 |
End bp | 3435050 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582673 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001263612 |
Protein GI | 148556030 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.687826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGGA AGTTTTTCGC GCTCACGGCG GCGCTGGCGA TGACGACGAT GCTCGCCGGC TGCGGCATCT TCGGCGGCGG CGAGGGCAAG AAGCCCAAGA CCCCGGTGCT GGGCCAGCGC ATCCCGATCC TGACCGCCGA GACCGGCGCG GAGGTCGATC CGACGCTGGA GGTGGTGCCG GTCACCGTGC CCGCCGAGCA GGTCAATCCC GAATGGGCCC AGCCGGGCGG CAACGCCACC AAGTCGATGG GCCATGTCGC GCTCGGCCAG CAGCTCGGCG TCGCCTGGGA CCGCAAGATC GCCGGATCGA CCAAGAAGGC CCGGCTCGCG GCCGGCCCGG TGGTCGGCGG CGGCCGCGTC TATGTGATCG ACGTCGATGC CGAGATCCAC GCCTATGACC TCAAGACCGG CGCGCCGGCC TGGACCGCCG TGCTATCCGA CAAGGGCGGC AACAAGGCGT CGCTGTTCGG CGGCGGCGTC AGCTACAGCA ACGGCAAGGT GTTCGCGACC AACGGCGTCG GCGATGCCGC CGCGTTCGAC GCCGGCAACG GCAGCCAGCT CTGGAAGGTG CGCCCGGGCG GCCCGCTGCG CGGCGCCCCG TCGGTCGGGA GCGATGCCGT CTATGTGATG AGCCAGGACA ACCAGCTCTT CGCGCTCAAG GAAACCAATG GCGAGCTGAT CTGGACCGCG AGCGGCAGCC TCGAGAACGC CGCCGTGTTC GGCGTCGGCG CGCCCGCCAT CGGCCAGGGC ACCGTCGTCG CCGGCTTCTC GTCGGGCGAG CTGACCGCCT ATCGCTACGA GAATGGCCGC GCGGTGTGGC AGGATTCGCT GTCGCGCACC AGCATCACCA CCTCGGTCGC CAGCCTCGTC GACATCGACG CCTCGCCGGT GATCGACCAG GGCCGCGTCT ATGCCGTCGG CCAGGGCGGC CGCATGGTCG CGATGGACAT CCTCACCGGC CAGCGCCTGT GGGAGCTCAA CATCGCCGGC ATCGAGACGC CGTGGGTCGC GGGCGAATGG CTGTTCCTCG TCACCGACGA CGCCAAGCTG CTCTGCATCG CCCGCAACAG CGGCCGCATC CGCTGGCAGA CCCAGCTCAC CCGCTGGAAG AACGTCAAGA AGAAGAGCAA GCCGATCGGC TGGTCGGGCC CGATCCTCGC CGGCGGCCGC CTGATCCTCA CCAACACCGA GGGCCAGGTC GTCAACGTCG CGGTCGACAC CGGCAAGGTC GGCTCGATCA CCAAGCTCGG CGACACCATC TACGCCGCGC CGGTGGTGGC GGACAACACG CTGCTCGTGC TGACCGACAA GGGAAAGCTG GTAGCGTATC GGTAG
|
Protein sequence | MTRKFFALTA ALAMTTMLAG CGIFGGGEGK KPKTPVLGQR IPILTAETGA EVDPTLEVVP VTVPAEQVNP EWAQPGGNAT KSMGHVALGQ QLGVAWDRKI AGSTKKARLA AGPVVGGGRV YVIDVDAEIH AYDLKTGAPA WTAVLSDKGG NKASLFGGGV SYSNGKVFAT NGVGDAAAFD AGNGSQLWKV RPGGPLRGAP SVGSDAVYVM SQDNQLFALK ETNGELIWTA SGSLENAAVF GVGAPAIGQG TVVAGFSSGE LTAYRYENGR AVWQDSLSRT SITTSVASLV DIDASPVIDQ GRVYAVGQGG RMVAMDILTG QRLWELNIAG IETPWVAGEW LFLVTDDAKL LCIARNSGRI RWQTQLTRWK NVKKKSKPIG WSGPILAGGR LILTNTEGQV VNVAVDTGKV GSITKLGDTI YAAPVVADNT LLVLTDKGKL VAYR
|
| |