| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3048 |
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| Symbol | |
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| ID | 5199135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3345738 |
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| End bp | 3348110 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582597 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263536 |
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| Protein GI | 148555954 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000159663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCCGCCA TCAGTCAGGA GAGGGGTAGC AACCATGCGA GGTTTGCGAC TGGGACTGCT
TTCGGCCACG GCGCTGGCAT GCGCCTGTTC CGCAGCACCG ATTTCGCGCA GAACGGATCC
CGCCAGGATC AACCCGAGGC GAGCGAAGCA GCTGATCAAT CGCTCGACAT CGTCGTGACC
GCGCGGAAAC GCAGCGAACG CATCTCGAAC GTCCCGATGA CGATCACGGC GGCGAGCGGC
GAGCAGCTCG CGATGCGCGG CATCAACGAC GTCGCCGACC TCGCCAAGGT GACGACCGCG
CTGACTGCGA CGACGACCTA CAGCTCGACG CCGGTCTATA CGATCCGCGG CATCGGCTTC
TACGACAACT CGCTGGCGAT CTCGCCTGCG GTCAGCGTCT ACACCGACCA GATCCCCCTG
CCCTTTTCGA TCATGACCGA GGGCGCGTCG CTCGACGTCG CGCGGGTCGA GGTGCTCAAG
GGACCGCAGG GCACGCTGTT CGGACAGAAT TCGACCGGCG GCGCGATCAA CTATGTCGCC
AACAAGCCGA CCGACCATTT CTCGGCCGGC GGCAAGATCG GCTATGGCCG GTTCAACGCG
ATCAACGCCA ACGCCTATGT CAGCGGACCG CTGTCCGACA CGCTGGGCGT GCGCGTGTCA
GGCGCGCTCG ACCGGCGCTC GCCCTGGCAG CAGAGCCTGT CCCGTCCGGG CGACGAACTC
GGCCGTCGCC GCTTCGCCAC CGGACGCCTG CTGCTCGACT GGAAGCCGAC CGACGCCCTC
CAGTTCGAGC TGAGCGTCAA CGGCTGGATC GACCGCAGCG ACACCCAGGC GGCGCAGTTC
CTCGACGTCC GGCCGACCGT GCCCGTGCCG CCGGGCTATG CCCCGCCGCT GGCCGCGCTC
GGCGGGCTGA CGTCGGCGCC GGACAAGGCG CGCCGGGCGG ATTGGACGCC CGGACGCGAC
TATGGCCGCC ACGACGATTT CCACCAGTTC GCGCTGCGCG GCGAATGGGA CGTCAACGAC
GCCGTCAAGC TGACGTCGAT CACCAGCTAT TCGGAACTGA AGCGCCGCGC GCGGACCGAT
CCGGATGGCG CCGCCTATCC CAATTCCGAC ATTTCGCAGA TCGGCAAGAT CAAGTCCTTC
TTCCAGGAGC TTCGCCTGGA GGGCCCGAGC GCCGACGGCC CGCTCAAATG GATGGTCGGC
GTCAACTATG CCAAGGACAG GTCGCGCGAC TATACGGCGG CCAACAATAT CGGCACCAAT
TCGCTGATCG CGGGCGTCTT CTTCATCGAC GGCGCCGGCA TGGTCAACAA CCAGAATGTC
GAGACCAAGG CCGCGTTCGG CAGCCTCGAC TACAAGATCA CCAGCACGCT CACGGCGCAG
GGATCGATCC GCTACACCGA TTCCAGGAAC CGCCATGCGG GTTGCGGAAC CGACCTCGGC
AACGGGCTTC TGGCGGCGGT CTTCTCGGGG CTCACCGGGG TCGCGATCCA GCCGGGCCAG
TGCGTGATGC TGGTGCCCGG CCCGTCGGGC GCGCCGGTGC CGTCCCTCAC CCCGGTCAAG
GGCAGCCTGG ACGAGGACAA TGTCTCGTGG AAGGCCGGGC TGAGCTGGAA GCCGACCAAC
GCGACGCTGC TCTATGCCTC GGTCACGCGC GGCTACAAGT CGGGCGTCTT CTCGACCCTG
CCCGCGCTCA GCCTCGCCCA GCTCGTGCCG GTGAAGCAGG AATCGATCCT GGCCTATGAG
GTCGGCCTCA AGCAGCAGCT CCTCGACAAC CGCGCCGACA TCACCCTGGC GGCGTTCCAC
TATGATTATG ACGACAAGCA GCTGCTCGGC TACATCGCGG TTCCGCCGTT CGGCAACCTG
CCCGGCATCG TCTCGATTCC GAAATCGCGC GTGAACGGCA TCGAGGGATC GCTCACCTGG
CGCCCGGCGA CCGGGCTGAC GCTGAGCGGC GGTGCCGCCT ATATCGCGTC GAAGGTGACC
AGAAGCGCCA TCAAATATGA CGCCGACAGC AATCTCGTCG ACGTCAAGGG CGAGGCCTTT
CCGTTCACGC CGAAATACCA GCTCACCGGC GACGCCCAGT ACGAGTTCCC GGTGTCGCAG
GAGCTGTCGG CCTTCGTCGG CGCCAACGCC CGCTACCAGA GTTCGAGCGC CGCTTCGTTC
GGCGGCAATC CGGCCTACCG GCTTCCGGGC TACACGCTGC TCGACCTGCG GGCGGGCATC
TTCCCGGGCG ACAACCGCTG GCGCTTCGAG GTCTGGGCGC ACAATGTGAC CGACAAATTC
TACGCGACCA ACATCATCCA CGTCGTCGAT ACGCGCGTCC GCCACGTCGG CATGCCGGCC
ACCTACGGCG CCAGCATCAG CTTCAAGATC TGA
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| Protein sequence | MPAISQERGS NHARFATGTA FGHGAGMRLF RSTDFAQNGS RQDQPEASEA ADQSLDIVVT
ARKRSERISN VPMTITAASG EQLAMRGIND VADLAKVTTA LTATTTYSST PVYTIRGIGF
YDNSLAISPA VSVYTDQIPL PFSIMTEGAS LDVARVEVLK GPQGTLFGQN STGGAINYVA
NKPTDHFSAG GKIGYGRFNA INANAYVSGP LSDTLGVRVS GALDRRSPWQ QSLSRPGDEL
GRRRFATGRL LLDWKPTDAL QFELSVNGWI DRSDTQAAQF LDVRPTVPVP PGYAPPLAAL
GGLTSAPDKA RRADWTPGRD YGRHDDFHQF ALRGEWDVND AVKLTSITSY SELKRRARTD
PDGAAYPNSD ISQIGKIKSF FQELRLEGPS ADGPLKWMVG VNYAKDRSRD YTAANNIGTN
SLIAGVFFID GAGMVNNQNV ETKAAFGSLD YKITSTLTAQ GSIRYTDSRN RHAGCGTDLG
NGLLAAVFSG LTGVAIQPGQ CVMLVPGPSG APVPSLTPVK GSLDEDNVSW KAGLSWKPTN
ATLLYASVTR GYKSGVFSTL PALSLAQLVP VKQESILAYE VGLKQQLLDN RADITLAAFH
YDYDDKQLLG YIAVPPFGNL PGIVSIPKSR VNGIEGSLTW RPATGLTLSG GAAYIASKVT
RSAIKYDADS NLVDVKGEAF PFTPKYQLTG DAQYEFPVSQ ELSAFVGANA RYQSSSAASF
GGNPAYRLPG YTLLDLRAGI FPGDNRWRFE VWAHNVTDKF YATNIIHVVD TRVRHVGMPA
TYGASISFKI
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