| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3038 |
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| Symbol | |
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| ID | 5198275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3331094 |
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| End bp | 3332473 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582587 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_001263526 |
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| Protein GI | 148555944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.883779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGTCA GCACATTCGA CATCTTCAAG CCGGGCGTGG GTCCGTCCTC GTCGCACACG
ATGGGGCCGA TGCTGGCAGG GCATCGCTTT GTCAGGGGCC TGGAAAGGGC CGGTACGCTG
GCAAGCGTCC AGCGTGTGGA GGTCGAGCTG TTGGGGTCGC TCGCTGCCAC CGGGCGTGGC
CATGGCACCG ACCGCGCCGT TCAGGTCGGC CTGGCTGGTT TCGATCCCGC GACTGTTGAG
CCAGACGACA TGTCCGCCAC CTTGTCGGCG ATCGCGACCG ATCGCAGCCT GTTCCTTGGG
GGCCGCCATG CGGTCCCATT CGATCCGGCT TCGGACATAT TGTGGTCGAA GACACCCCAT
AAGCTCCATC CCAACGCGGT GCGCTTCACT GCGCTGAGCG GGCCGCAGTC GGTACTCGAA
AGCCGTCTCT TCTTCTCTGT CGGCGGCGGC TTCGTCGTTG ATGAGGCCGA GTTCAAAGCG
GCCGCGAGCG CCGATCCGCA GCAGGCGGAC GTCCGATACG CCTTCGCCTC GGCCGCCGAA
CTTCTGTCGC TCGCCGACAA CGCCGGGATC AGCATTGCCG ACCTGATGCG CGCGAATGAG
CGGTCGCGCG GCGCCACGGA TGAGGAGATC GATCTTCGTC TCGACGCCGT CTGGTCGCGC
ATGGCGGCGT GCGTCGCGCG CGGGCTGCAA CAGGAAGGCG AATTGCCTGG CGGGCTGCGT
GTCAAACGCC GGGCAAGACC GGTGCACGAT GCGCTGAGGG CCAGGCCCGA GATGCTGATC
GTCGATCCGC TGACGGCGAT GGATTTCGTG AACGTGTGGG CGCTCGCGGT GAACGAGGAG
AATGCGGCCG GCGGGGCGGT CGTCACCGCT CCCACTAACG GCGCGGCCGG CATCATCCCG
GCGGTACTGA TGTATTTCAC GAAGCTTCGC GGCGGTACGG ACAGTGGCGT TCGGACGCTC
CTGCTGACGG CTGCCGCGAT CGGCGCACTC TACAAGCGGA ATGCCTCGAT CTCGGGCGCC
GAGGTCGGTT GCCAGGGCGA GGTCGGCGTG GCCTGCTCGA TGGCCGCAGC CGGGCTGACC
GCCGCACTGG GCGGCACCAA TGCCCAGATC GAGAATGCCG CCGAGATCGG CATGGAGCAT
AATCTCGGCC TGACCTGCGA TCCGATTGGC GGCCTCGTGC AGATTCCCTG CATCGAACGG
AACGCAATGG GAGCGATCAA GGCGATCGAT GCATCGCGGC TGGCGCTGCT GGGGGATGGG
ACGCACCATG TCAGTCTCGA CAAGGTCATC GCGACGATGC GCGAGACCGG ACGGGACATG
CACCGCCGCT ACAAGGAGAC CTCCGAAGGG GGCCTCGCCG TCAACGTCGT CGAGTGCTGA
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| Protein sequence | MVVSTFDIFK PGVGPSSSHT MGPMLAGHRF VRGLERAGTL ASVQRVEVEL LGSLAATGRG
HGTDRAVQVG LAGFDPATVE PDDMSATLSA IATDRSLFLG GRHAVPFDPA SDILWSKTPH
KLHPNAVRFT ALSGPQSVLE SRLFFSVGGG FVVDEAEFKA AASADPQQAD VRYAFASAAE
LLSLADNAGI SIADLMRANE RSRGATDEEI DLRLDAVWSR MAACVARGLQ QEGELPGGLR
VKRRARPVHD ALRARPEMLI VDPLTAMDFV NVWALAVNEE NAAGGAVVTA PTNGAAGIIP
AVLMYFTKLR GGTDSGVRTL LLTAAAIGAL YKRNASISGA EVGCQGEVGV ACSMAAAGLT
AALGGTNAQI ENAAEIGMEH NLGLTCDPIG GLVQIPCIER NAMGAIKAID ASRLALLGDG
THHVSLDKVI ATMRETGRDM HRRYKETSEG GLAVNVVEC
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