| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3037 |
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| Symbol | |
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| ID | 5198274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3329225 |
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| End bp | 3331081 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582586 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001263525 |
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| Protein GI | 148555943 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCT ATCGCTCGCG CACGTCCACC CATGGTCGCA ACATGGCGGG TGCGCGCGCC
CTGTGGCGTG CGACCGGCAT CAAGGATGGC GACTTCGGCA AGCCGATCAT CGCGATCGCC
AACAGCTTCA CCCAGTTCGT GCCCGGCCAC ATCCATCTGA AGGATCTCGG CCAGATGGTC
GCGCGCGAGA TCGAGGCGCA TGGCGGCATC GCCAAGGAGT TCAATACCAT CGCCGTCGAC
GACGGCATCG CCCAGGGCCA TCTCGGCATG CTCTACTCGC TGCCAAGCCG GGAGATCATC
GCCGATGCGG TAGAATATAT GGTCAACGCG CATTGCGCCG ACGCGCTGGT GTGCATCTCC
AACTGCGACA AGATCACGCC GGGGATGCTG ATGGCGGCGC TCCGGCTCAA CGTCCCGACC
GTCTTCGTGT CGGGCGGCCC CATGGAGGCG GGGAAGATAG TGGCTGCCGA CGGCAAGCTG
CGCGTGATCG ACACCGTCGA TCCCATGGTT CTGGCCGGCG ATCCGACGGT GAGCGACGAA
GAGGTCGAGG CCTATGAGAA GTCGGCCTGC CCGACCTGCG GCTCCTGCGC CGGCATGTTC
ACTGCCAATT CGATGAACTG CCTGACGGAG GCGCTGGGCC TTTCACTGCC GGGCAATGGC
ACGACGCTCG CGACCCATGC CGACCGGCGC AGCCTCTTTC TCGAAGCTGC CCGCACGATC
ATGCGGATCA CCAGGCGCTA TTATGAGGAG GAGGACGGGA GCATCCTGCC GCGTGGCATC
GCCGGCTTCG CGGCGTTCGA GAATGCCATG CGGCTGGACA TGGCGATGGG CGGCAGCACC
AATACGATCC TCCACCTGCT CGCGGCGGCG CGCGAAGCGG AGGTCGACTT CACCATGGCC
GATATCGACC GGTTGTCCCG CGACACGCCC TGTCTGTGCA AGGTCGCGCC CAACAACAGC
AACGTCCATA TCGAGGATAT CCATCGCGCC GGTGGCATCA TGTCGATCCT CGGACAGATC
GACCGGGCCG GCTTGCTCAA TCGCGATTGT GCGACGATCC ATAGCCCGAC GCTCGCCGAA
GCGCTCGACC GCTGGGACAT TTCCCGCACC GACGATGCTG AGGTGGAGAG CTTCTACAAG
GCGGCGCCGG GCGGCGTGCG CACGACCGAG GCGTTCAGCC AGGCGAAGCG CTGGAGCGAA
CTCGATACTG ATCGCGAGAC GGGCGTGATC CGCAGCGCCG ACCATGCCTT CTTCAAGGAT
GGCGGTCTGG CGGTATTGTA CGGAAACATC GCGCGCGACG GTTGCATCGT CAAAACCGCC
GGCGTCGACG AGGCGATCCT GAAATTCTCG GGATCGGCGG TAATCTGCGA GAGCCAGGAC
GACGCGGTTG CGAAGATCCT GGGTGACAAG GTCAAGGCCG GAGACGTGGT GGTCGTGCGT
TATGAAGGAC CGAAAGGCGG CCCCGGCATG CAGGAGATGC TGTATCCGAC CAGCTATCTG
AAGGCGCGGG GGCTCGGCAA AGCCTGTGCC CTGATTACCG ATGGCCGCTT CTCGGGAGCG
ACCTCGGGTC TTTCGATCGG CCATGTCTCC CCCGAAGCGG CCGAAGGCGG AGCGATCGGG
TTGATCGAGG ATGGCGACAT CATCGAGATC GACATCCCCG CACGGCGGAT CGACGTGCGG
CTATCCGAGG CCGAACTGGC CGCTCGCCGC GCTGCCATGG AGGCAAGGGG CACCGTCGCG
TGGCAGCCAG TCGATCGCGA CCGGCCGGTC AGCATGGCGC TGCGCGCCTA TGCTGCTCTG
ACGACGAGTG CCGCCCATGG GGCAGTGCGC GATGCCACCC AATTGGCGAG GCGATGA
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| Protein sequence | MPAYRSRTST HGRNMAGARA LWRATGIKDG DFGKPIIAIA NSFTQFVPGH IHLKDLGQMV
AREIEAHGGI AKEFNTIAVD DGIAQGHLGM LYSLPSREII ADAVEYMVNA HCADALVCIS
NCDKITPGML MAALRLNVPT VFVSGGPMEA GKIVAADGKL RVIDTVDPMV LAGDPTVSDE
EVEAYEKSAC PTCGSCAGMF TANSMNCLTE ALGLSLPGNG TTLATHADRR SLFLEAARTI
MRITRRYYEE EDGSILPRGI AGFAAFENAM RLDMAMGGST NTILHLLAAA REAEVDFTMA
DIDRLSRDTP CLCKVAPNNS NVHIEDIHRA GGIMSILGQI DRAGLLNRDC ATIHSPTLAE
ALDRWDISRT DDAEVESFYK AAPGGVRTTE AFSQAKRWSE LDTDRETGVI RSADHAFFKD
GGLAVLYGNI ARDGCIVKTA GVDEAILKFS GSAVICESQD DAVAKILGDK VKAGDVVVVR
YEGPKGGPGM QEMLYPTSYL KARGLGKACA LITDGRFSGA TSGLSIGHVS PEAAEGGAIG
LIEDGDIIEI DIPARRIDVR LSEAELAARR AAMEARGTVA WQPVDRDRPV SMALRAYAAL
TTSAAHGAVR DATQLARR
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