Gene Swit_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3021 
Symbol 
ID5197147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3307313 
End bp3308191 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID640582570 
Productpeptidase S15 
Protein accessionYP_001263509 
Protein GI148555927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGAGA ATATCACGTT CGAATCCGAT GGGCTGAAGC TGTCGGGCGT CATCCATGTG 
CCGGACGGCC ACAAGGGCGA GCCGTTGCCG GCGTTCATCG TCTGCCACGG GTTCGTCGGT
TCCAAGGACG AGAGCCACGC GCAGATCCAG GCCGAGATGA TGGAGCAGTT CGGCTATGTC
GCCCTGCGCT TCGATTTCCG GAGCTGCGGC GAAAGCGAAG GCGAGCGCGC CCAGGTGCGC
TGCTTCGACC AGGTCGCGGA CGCCAAGAAC GCGGTGACCT GGCTGGCGAA GCGGCCCGAG
GTCGATCCGA AGCGGATCGG GATCACCGGC CACAGCTTCG GCGCGGCGGT CTCGGTCTAT
ACCGCGGGCG TCGACGATCG CATCGCCTGC TGCCTGTCGT CGTGCGGCTG GGGCGACGGG
GAGCGCAAAT TCCGCGGCCA GCATCCGACC CGGGAATCCT GGGACAGGTT CATCGGCATC
CTCGAAGAGG GGCGGGCGCA CAAGCAGGCG ACGGGGGAGA GCCTCTGGAT GTCGCGCTTC
GATGCGGTGC CGATCCCGGA GGCGTTACGG AAGAACCTGT CGCCCAAGGC GATCATGGAG
ATCCCGACCG AAACCGCCTG GTCGATGATG AACTTCCGGG CCGACGACGT CGTCGCGAAC
ATCGCGCCGC GCCCGTTGCT GCTGTTCCAC ACCGCCAACG ACATCATCAC CCCGACGATC
GAGTCGGTCC GCATGTTCGA GAAGGCCGGC CAGCCGACCG AGCTGATGCT GATCGACACC
ACGGCGCATT TTCCGCTGGC GCCGGCCGAC GCGCCGCGCA CCAGGATGAT GATGAAGGGC
TGGCTCGACA AATTCTTCCC CTCTCCGTTG GCGGGGTGA
 
Protein sequence
MQENITFESD GLKLSGVIHV PDGHKGEPLP AFIVCHGFVG SKDESHAQIQ AEMMEQFGYV 
ALRFDFRSCG ESEGERAQVR CFDQVADAKN AVTWLAKRPE VDPKRIGITG HSFGAAVSVY
TAGVDDRIAC CLSSCGWGDG ERKFRGQHPT RESWDRFIGI LEEGRAHKQA TGESLWMSRF
DAVPIPEALR KNLSPKAIME IPTETAWSMM NFRADDVVAN IAPRPLLLFH TANDIITPTI
ESVRMFEKAG QPTELMLIDT TAHFPLAPAD APRTRMMMKG WLDKFFPSPL AG