Gene Swit_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2992 
Symbol 
ID5200876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3278410 
End bp3279456 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID640582541 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001263481 
Protein GI148555899 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.857355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TGTTCCAGAG CTGGGGCCTG CCCTACGACT GGGCCTGGTT CGTCTCGACC 
ATCATCGGCA TCCTCGTCAT CGCGCTGCCG CTGATGCTCG CGGTGGCGAT GATCATCTAC
GCCGATCGCA AGATCTGGGC GGCGATGGCG CTGCGCCGCG GCCCGAACGT CGTCGGGCCC
TGGGGCCTGC TGCAGAGCTT CGCCGACGGC GCCAAGGTGT TCCTCCAGGA GACCATCATC
CCGGCCGCCG CGAACAAGGG CCTGTTCCTG CTCGCGCCGA TCATCACCTT CACGGTCGCG
CTGATCGTCT GGGCGGTGAT CCCGTTCGCG CCGGGCGTGG TGCTCGCCGA CATCAACATC
GGCCTGCTCT ACGTGCTCGC CGCCTCGTCG ATCGGCGTCT ATGGCGTGAT CATCGCGGGC
TGGGCGTCCA ACTCCAAATA TCCCTTCTAC TCGGCGCTCC GTGCGGCCGC GCAGATGGTC
AGCTATGAGG TCTCGATCGG CTTCGTGCTG ATCTCGGTCG TGCTGTGGAC CGGCAGCTTC
AACATGTCGG CGATCGTCGA GGGGCAGCGC GCCCACATCT TCGGCTTCAT CAACGGCTAC
GGCTTCAACC CGCTGCTCTT CCCGATGGCG GTGGTGTTCC TGATCTCGGC GATGGCGGAG
ACCGCGCGCA CCCCGTTCGA CCTGACCGAG GCCGAATCGG AGCTCGTCGC CGGCTACCAG
ACCGAATATT CGTCGATGTC GTTCGCGCTC TACTGGCTCG GCGAATATGC CAACGTTATC
CTGATGTGCG GCCTCAACGC GATCCTGTTC TGGGGCGGCT GGCTGCCCCC GGTCGACTGG
GCGCCGCTCT ACATGGTGCC GGGCATCATC TGGTTCTTCG CCAAGCTGCT GTTCTTCTTC
TTCGTCTTCT CCTGGGTGAA GGCGACGGTC CCGCGCTACC GCTACGACCA GCTCATGCGG
CTGGGGTGGA AGGTCTTCCT GCCGCTGTCG CTGTTCTGGG TGTTCCTCGT TTCGGGGTGG
CTGATGCTCA CCCGCTATGG AGTCTGA
 
Protein sequence
MTALFQSWGL PYDWAWFVST IIGILVIALP LMLAVAMIIY ADRKIWAAMA LRRGPNVVGP 
WGLLQSFADG AKVFLQETII PAAANKGLFL LAPIITFTVA LIVWAVIPFA PGVVLADINI
GLLYVLAASS IGVYGVIIAG WASNSKYPFY SALRAAAQMV SYEVSIGFVL ISVVLWTGSF
NMSAIVEGQR AHIFGFINGY GFNPLLFPMA VVFLISAMAE TARTPFDLTE AESELVAGYQ
TEYSSMSFAL YWLGEYANVI LMCGLNAILF WGGWLPPVDW APLYMVPGII WFFAKLLFFF
FVFSWVKATV PRYRYDQLMR LGWKVFLPLS LFWVFLVSGW LMLTRYGV