Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2992 |
Symbol | |
ID | 5200876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3278410 |
End bp | 3279456 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640582541 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001263481 |
Protein GI | 148555899 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.857355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC TGTTCCAGAG CTGGGGCCTG CCCTACGACT GGGCCTGGTT CGTCTCGACC ATCATCGGCA TCCTCGTCAT CGCGCTGCCG CTGATGCTCG CGGTGGCGAT GATCATCTAC GCCGATCGCA AGATCTGGGC GGCGATGGCG CTGCGCCGCG GCCCGAACGT CGTCGGGCCC TGGGGCCTGC TGCAGAGCTT CGCCGACGGC GCCAAGGTGT TCCTCCAGGA GACCATCATC CCGGCCGCCG CGAACAAGGG CCTGTTCCTG CTCGCGCCGA TCATCACCTT CACGGTCGCG CTGATCGTCT GGGCGGTGAT CCCGTTCGCG CCGGGCGTGG TGCTCGCCGA CATCAACATC GGCCTGCTCT ACGTGCTCGC CGCCTCGTCG ATCGGCGTCT ATGGCGTGAT CATCGCGGGC TGGGCGTCCA ACTCCAAATA TCCCTTCTAC TCGGCGCTCC GTGCGGCCGC GCAGATGGTC AGCTATGAGG TCTCGATCGG CTTCGTGCTG ATCTCGGTCG TGCTGTGGAC CGGCAGCTTC AACATGTCGG CGATCGTCGA GGGGCAGCGC GCCCACATCT TCGGCTTCAT CAACGGCTAC GGCTTCAACC CGCTGCTCTT CCCGATGGCG GTGGTGTTCC TGATCTCGGC GATGGCGGAG ACCGCGCGCA CCCCGTTCGA CCTGACCGAG GCCGAATCGG AGCTCGTCGC CGGCTACCAG ACCGAATATT CGTCGATGTC GTTCGCGCTC TACTGGCTCG GCGAATATGC CAACGTTATC CTGATGTGCG GCCTCAACGC GATCCTGTTC TGGGGCGGCT GGCTGCCCCC GGTCGACTGG GCGCCGCTCT ACATGGTGCC GGGCATCATC TGGTTCTTCG CCAAGCTGCT GTTCTTCTTC TTCGTCTTCT CCTGGGTGAA GGCGACGGTC CCGCGCTACC GCTACGACCA GCTCATGCGG CTGGGGTGGA AGGTCTTCCT GCCGCTGTCG CTGTTCTGGG TGTTCCTCGT TTCGGGGTGG CTGATGCTCA CCCGCTATGG AGTCTGA
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Protein sequence | MTALFQSWGL PYDWAWFVST IIGILVIALP LMLAVAMIIY ADRKIWAAMA LRRGPNVVGP WGLLQSFADG AKVFLQETII PAAANKGLFL LAPIITFTVA LIVWAVIPFA PGVVLADINI GLLYVLAASS IGVYGVIIAG WASNSKYPFY SALRAAAQMV SYEVSIGFVL ISVVLWTGSF NMSAIVEGQR AHIFGFINGY GFNPLLFPMA VVFLISAMAE TARTPFDLTE AESELVAGYQ TEYSSMSFAL YWLGEYANVI LMCGLNAILF WGGWLPPVDW APLYMVPGII WFFAKLLFFF FVFSWVKATV PRYRYDQLMR LGWKVFLPLS LFWVFLVSGW LMLTRYGV
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