Gene Swit_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2923 
Symbol 
ID5199291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3209607 
End bp3210098 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content74% 
IMG OID640582473 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001263413 
Protein GI148555831 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.650072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGGC CGGCCGACGA GCAGCGCTTC CTGCGCGCCG CGATCGAGCT GGCGCGCGAC 
AATGTCGCGC AGGGCGGGCG GCCGTTCGGC GCGGTGGTGG TGAAGGACGG CGCGATCGTG
GCCGTCGGCG TCAACGAGAT CCTCGCCACC AACGACCCGA CCGCCCATGC CGAGCTCGGC
GCGATCCGCG CGGCGGGGCG CCGGCTCGGC TCGCCCGATC TGAGCGGCTG TACCGTCTAT
GCCAGCGGCC ACCCCTGCCC GATGTGCATG GCGGCGATGC GGATGGCCGG GATCGGCGCG
GTCGCCTATG CCTATTCGAA CGAGGACGGC GAACCGTTCG GCCTGTCGAC CGCCGCCGTC
CAGGCGGCGA TCCTCGCCGA TCTCGCCCGC CCGGCCGACG AACAGGCGAT GGCGGCCCGC
CACCAGCCGG TCGACGGCGC GGAGCGACCC GACATCTATG CCGAATGGCG GCGGCGACGC
GACCGTGCGT GA
 
Protein sequence
MTGPADEQRF LRAAIELARD NVAQGGRPFG AVVVKDGAIV AVGVNEILAT NDPTAHAELG 
AIRAAGRRLG SPDLSGCTVY ASGHPCPMCM AAMRMAGIGA VAYAYSNEDG EPFGLSTAAV
QAAILADLAR PADEQAMAAR HQPVDGAERP DIYAEWRRRR DRA