| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2912 |
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| Symbol | |
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| ID | 5198176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3198985 |
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| End bp | 3199827 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582462 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001263402 |
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| Protein GI | 148555820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGTAGCG ACCCTGAACT TGATTCAGGG GAGCTTCCTC GCTCGCCCCG TCAGGCTGCG
CCGGAGGCAT CGAGCCTCCG GCTTCGCCAC CCACCCCCAA GCCCCTCCCT TGCAGGGAGG
GGAGCGATCT CCCGGTTGCC TCCACCTCCC CCAAAGGCTA CTCGCCCGGC CATGCCGCCC
GCGCTCGACC ATATCGACGC CTGGATCTTC GATCTGGACA ACACGCTCTA CCCGGCGTCG
GCGGACCTGT TCGGGCGGAT CGACGTGCGG ATGGGCCTCT ATGTCGAGCG GCTGCTGGGC
GTCGACCCGG TCGAGGCCAG GCGCATCCAG AAGCAGCTGT TCCGCGAGCA TGGCACCACC
CTGTCGGGGC TGATGCACAG CCACGCGATC GACCCGCACG AATTCCTCGC CTTCGTCCAC
GACATCGAGA TGGACGTGCT CGCCGAGGAC AGGCGGCTGG TGAACGCGAT CGCGAAGCTG
CCCGGGCGCA AGCTGATCTT CACCAATGGC GACGCCGACT ATGCCGGGCG GGTGCTCGAG
CGGCTCGGCC TGTCGCGGAG CTTCGAGGCG ATCCACGACA TCCACGCCTG CGCCTATCAG
CCCAAGCCGC AGGCGGCGAG CTACGCATCG ATGGTCGAGG CGTTCGGCGT CGACCCGGCG
ACCTCGCTGT TCGTCGAGGA CATGGCCCGC AACCTCAAGC CCGCCAAGGC GATCGGCATG
ACCACGGTGT GGGTCAACAA CGGTTCCGAG TTCGGCAACC ACGAGGCCGA CGCCAGCTTC
ATCGATATCG AGATACACGA CGTCGGCCAC TGGCTCGACG AACTCACAAG GGGAATGGAA
TGA
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| Protein sequence | MGSDPELDSG ELPRSPRQAA PEASSLRLRH PPPSPSLAGR GAISRLPPPP PKATRPAMPP
ALDHIDAWIF DLDNTLYPAS ADLFGRIDVR MGLYVERLLG VDPVEARRIQ KQLFREHGTT
LSGLMHSHAI DPHEFLAFVH DIEMDVLAED RRLVNAIAKL PGRKLIFTNG DADYAGRVLE
RLGLSRSFEA IHDIHACAYQ PKPQAASYAS MVEAFGVDPA TSLFVEDMAR NLKPAKAIGM
TTVWVNNGSE FGNHEADASF IDIEIHDVGH WLDELTRGME
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