| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2911 |
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| Symbol | |
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| ID | 5198175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3198164 |
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| End bp | 3198988 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582461 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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| Protein accession | YP_001263401 |
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| Protein GI | 148555819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.718731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG ATCTGCAGAC GATCATCGAG AAGGCCTGGG ACGAGCGCGA GGGCGTCACC
TTCTCGACCA AAGGCGAGGT GCGCGACGCG GTCGAGAGCG CGCTCGGCCT GCTCGATTCG
GGCGCGCGGC GCGTCGCCGA GAAGGGCGCT GAAGGCTGGA CCGTCAACCA GTGGCTCAAG
AAGGCGGTGC TGCTCTCCTT CCGCCTCAAC GACATGGAAC TGATCCCCGG CGGCCCCGGC
GGCGCGAGCT GGTGGGACAA GGTCCCGTCG AAGTTCGCCG CATGGGGCGA GGCCGAGTAT
CGCGCCGCCG GCTTCCGCGC GGTGCCGGGA TCGATCGTCC GCCGCGGCGC GCACATCGCC
AGGGGCGCGG TGCTGATGCC GAGCTTCGTC AACCTCGGCG CCTATGTCGG CGAGAACACG
ATGGTCGACA CCTGGGCGAC GGTCGGCAGC TGCGCGCAGA TCGGCAGCAA CGTCCACCTG
TCGGGCGGCG TCGGCATCGG CGGCGTGCTC GAGCCGCTCC AGGCCGGCCC GGTGGTGATC
GAGGACGACT GCTTCATCGG CGCCCGTTCC GAGGTCGCCG AGGGCGTGGT GGTCGAGCAG
GGCGCGGTGC TGTCGATGGG CGTCTATCTC GGCGCCTCGA CCAAGATCGT CGACCGCGCC
ACCGGCGAGG TCTTCGTCGG CCGCGTGCCG AGCTATGCGG TGGTCGTCCC GGGCACCTTG
CCCGGCAAGG ACGGCGGCCC GGGCCTCTAC TGCGCCGTGA TCGTCAAGCG CGTCGACGCG
CAGACCCGGT CGAAGACGGG GATCAACGAG CTGCTGCGGG ATTGA
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| Protein sequence | MSGDLQTIIE KAWDEREGVT FSTKGEVRDA VESALGLLDS GARRVAEKGA EGWTVNQWLK
KAVLLSFRLN DMELIPGGPG GASWWDKVPS KFAAWGEAEY RAAGFRAVPG SIVRRGAHIA
RGAVLMPSFV NLGAYVGENT MVDTWATVGS CAQIGSNVHL SGGVGIGGVL EPLQAGPVVI
EDDCFIGARS EVAEGVVVEQ GAVLSMGVYL GASTKIVDRA TGEVFVGRVP SYAVVVPGTL
PGKDGGPGLY CAVIVKRVDA QTRSKTGINE LLRD
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