Gene Swit_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2904 
Symbol 
ID5199198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3190974 
End bp3191669 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID640582454 
Producthypothetical protein 
Protein accessionYP_001263394 
Protein GI148555812 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.796329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC TCGCCGACCG CGCCCGCAGC CAGCGCCAGC TCTGGGCGGC CAGCGGCAGC 
AGCCACGACC GGGTGATCGC GATCCTGCGG ATCGTGCTGC CGGTCGCGAT CGGCGTGCTC
GTCGTGCTGC TCGCGCTCGC GCCGCTGACG GTCGGGCGCG ACATCAGCTT CGTCCTGTCG
AAGGATCGGG TCGAGGTGGC GCGCGAACGG ATGCGGGTGA CCGCCGCCAC CTATCGCGGC
CAGGATTCGA AGGGCCAGCC CTTCCAGCTC ACCGCCGGCT CGGCGGTGCA GGCCACCTCG
CGCGATCCGG TGGTGCGGCT CCAGAAGCTC GCCGCCGAGA TCCAGCTTCC CGAGGGGCCG
GCGAAGATCG TCGCCGGGCA CGGCCGCTAC GACATGGACA GCGAGAAGGT CGCGGTCGAC
GGGCCGGTCC ACCTGCGTTC GGCCGACGGC TACAACATCG AGACCCGCGA CGTCGGCATC
GACCTCAAGA CGCGCCAGGT CGCGAGCCAG GGCCCGGTCG ACGGCCGGAT GAACATCGGC
ACCTTCTCCG GCGACCGCTT CACCGCCGAT CTCAACAAGC GGATCGTCGT GCTCGAAGGC
CGAGCCCGCT TGCATATCGA TCAGCGACAG GCCAAGGCAG CGCCCAAGCC CCAGGCCGGG
GCGAGAGTCG GCGCGAAGGT CGGAGGGCAG CGGTGA
 
Protein sequence
MSELADRARS QRQLWAASGS SHDRVIAILR IVLPVAIGVL VVLLALAPLT VGRDISFVLS 
KDRVEVARER MRVTAATYRG QDSKGQPFQL TAGSAVQATS RDPVVRLQKL AAEIQLPEGP
AKIVAGHGRY DMDSEKVAVD GPVHLRSADG YNIETRDVGI DLKTRQVASQ GPVDGRMNIG
TFSGDRFTAD LNKRIVVLEG RARLHIDQRQ AKAAPKPQAG ARVGAKVGGQ R