Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2903 |
Symbol | |
ID | 5200903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3190223 |
End bp | 3190840 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582453 |
Product | 3'-5' exonuclease |
Protein accession | YP_001263393 |
Protein GI | 148555811 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.865613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCC ATCTCCATCA GGAAGACCTG CCCGCCGACG CGCTCGGCCC CGGCCCGGTC GCGGTCGACA CCGAGACGAT GGGGCTGATC ACCCCGCGCG ACCGGCTCTG CCTCGTCCAG ATCTCCGACG GGCGCGGCGA CGAGCATCTC GTCCGCTTCG CCCCCGGCAG CGACTATGCC GCGCCGAACC TGCGCGCGGT GCTCGCCGAT CCGGCCCGGC TCAAGCTCTA CCATTTCGCC CGCTTCGACC TGGCGGCGAT CAGGCATTAT ATCGGGGTGA TGGCCGCGCC GGTCTATTGC ACCAAGACGG CGTCGCGGCT GATCCGCACC TATACCGACC GCCACGGCCT CAAGGAGCTG GTGCGCGAGC TGCTCGGCCA GGAGGTGTCG AAGCAGCAGC AATCGTCCGA CTGGGGGGCG CCCGACCTGT CCGAGGCGCA GAAGGACTAT GCCGCGTCCG ACGTCCGCTA TCTCCACGCG ATGCGGACGA TCCTCGACGA GCGGCTGGCG CGCGAGGGAC GGACCGCGCT GGCGCAGGCC TGCTTCGACT TCCTGCCCGC CCGCGCCGAG CTCGACCTCG CCGGCTGGCC GGAGATCGAC ATCTTCGCGC ATGTTTGA
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Protein sequence | MTVHLHQEDL PADALGPGPV AVDTETMGLI TPRDRLCLVQ ISDGRGDEHL VRFAPGSDYA APNLRAVLAD PARLKLYHFA RFDLAAIRHY IGVMAAPVYC TKTASRLIRT YTDRHGLKEL VRELLGQEVS KQQQSSDWGA PDLSEAQKDY AASDVRYLHA MRTILDERLA REGRTALAQA CFDFLPARAE LDLAGWPEID IFAHV
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