Gene Swit_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2894 
Symbol 
ID5200251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3181199 
End bp3182731 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content66% 
IMG OID640582444 
Productcarboxyl transferase 
Protein accessionYP_001263384 
Protein GI148555802 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.437903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGA TCCTGCAGAA GCTCGAGGAG AAGCGCGCGG CGGCGCGGCT GGGCGGCGGC 
GAGAAGCGCA TCGAGGCGCA GCACCGCAAG GGCAAGCTGA CCGCCCGCGA GCGCATCGAG
GTGCTGCTCG ACGCCGACAG CTTCGAGGAG CTCGACATGT ATGTCGAGCA CAACTGCACC
GATTTCGGCA TGGAGGCCGA GCATATCCCC GGCGACGGCG TCGTCACCGG ATCGGGCACG
GTCAACGGCC GCCTCGTCTT CGTCTTCAGC CAGGACTTCA CCGTCTATGG CGGCGCGCTG
TCGGAACGGC ACGCGCAGAA GATCTGCAAG ATCATGGACA TGGCGATGAA GGTCGGCGCG
CCGGTGATCG GCCTCAACGA TTCGGGCGGC GCCCGCATCC AGGAGGGCGT CGCCTCGCTG
GGCGGCTATG CCGAGGTGTT CCAGCGCAAC ATCCTGGCGT CGGGCGTGAT CCCGCAGATC
AGCGTGATCA TGGGCCCCTG CGCGGGCGGC GCGGTCTATT CGCCGGCGAT GACCGACTTC
ATCTTCATGG TGAAGGACAG CTCGTTCATG TTCGTCACCG GCCCCGACGT GGTCAAGACC
GTCACCAACG AGGTGGTGAC GCAGGAGGAG CTGGGCGGCG CCGTCACCCA CACCACCAAG
ACCTCGGTCG CGGACAACGC CTTCGACAAC GACATCGAGG CGCTGCTGTC GGTGCGCGAG
TTCGTCGACT TCCTGCCGCT GTCGAACCGG CACGACCTGC CCGAGCGGCC GACCGACGAC
CCCTGGGACC GCGCCGAGCC GAGCCTCGAC ACGCTGATCC CCGACAGCGC GACCAAGCCC
TACGACATGA AGGAGCTGAT CGCGAAGGTC GTCGACGAGG GCGACTTCTT CGAGGTGCAG
CCGAACCATG CCGGCAATAT CGTGATCGGC TTCGGCCGGA TCGAGGGCCG CCCGGTCGGC
ATCGTCGCCA ACCAGCCGAT GGTGCTGGCC GGCTGTCTCG ACATCAACTC GTCGAAGAAG
GCGGCGCGCT TCGTCCGCTT CTGCGACGCG TTCGACATCC CGATCGTCAC CTTCGTCGAC
GTGCCCGGCT TCCTGCCCGG CACCGCGCAA GAGCATAACG GCATCATCAA GCATGGCGCC
AAGCTGCTGT TCGCCTATGG CGAGGCGACC GTCCCGAAGA TCACCGTCAT CACCCGCAAG
GCCTATGGCG GCGCCTATGA CGTGATGGCG TCGAAGCATC TGCGCGGCGA CCTCAACTAT
GCCTGGCCGA CCGCCGAGAT CGCGGTGATG GGCGCCAAGG GCGCGGTCGA GATCATCTTC
CGCAAGGACA TCGGCGACGC CGCGAAGATC GCCGAGCGCA CCAGGGAATA TGAGGACCGC
TTCGCCAACC CGTTCGTGGC GGCGTCGAAG GGCTTCATCG ACGAGGTGAT CATGCCGCAT
TCGACCCGCC GGCGGATCGC GCTCGGCCTG CGCAAGCTGC GCAACAAGAG CCTCGAGAAT
CCCTGGAAGA AGCACGACAA CATTCCCTTG TGA
 
Protein sequence
MLAILQKLEE KRAAARLGGG EKRIEAQHRK GKLTARERIE VLLDADSFEE LDMYVEHNCT 
DFGMEAEHIP GDGVVTGSGT VNGRLVFVFS QDFTVYGGAL SERHAQKICK IMDMAMKVGA
PVIGLNDSGG ARIQEGVASL GGYAEVFQRN ILASGVIPQI SVIMGPCAGG AVYSPAMTDF
IFMVKDSSFM FVTGPDVVKT VTNEVVTQEE LGGAVTHTTK TSVADNAFDN DIEALLSVRE
FVDFLPLSNR HDLPERPTDD PWDRAEPSLD TLIPDSATKP YDMKELIAKV VDEGDFFEVQ
PNHAGNIVIG FGRIEGRPVG IVANQPMVLA GCLDINSSKK AARFVRFCDA FDIPIVTFVD
VPGFLPGTAQ EHNGIIKHGA KLLFAYGEAT VPKITVITRK AYGGAYDVMA SKHLRGDLNY
AWPTAEIAVM GAKGAVEIIF RKDIGDAAKI AERTREYEDR FANPFVAASK GFIDEVIMPH
STRRRIALGL RKLRNKSLEN PWKKHDNIPL