Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2894 |
Symbol | |
ID | 5200251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3181199 |
End bp | 3182731 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640582444 |
Product | carboxyl transferase |
Protein accession | YP_001263384 |
Protein GI | 148555802 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.437903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCGA TCCTGCAGAA GCTCGAGGAG AAGCGCGCGG CGGCGCGGCT GGGCGGCGGC GAGAAGCGCA TCGAGGCGCA GCACCGCAAG GGCAAGCTGA CCGCCCGCGA GCGCATCGAG GTGCTGCTCG ACGCCGACAG CTTCGAGGAG CTCGACATGT ATGTCGAGCA CAACTGCACC GATTTCGGCA TGGAGGCCGA GCATATCCCC GGCGACGGCG TCGTCACCGG ATCGGGCACG GTCAACGGCC GCCTCGTCTT CGTCTTCAGC CAGGACTTCA CCGTCTATGG CGGCGCGCTG TCGGAACGGC ACGCGCAGAA GATCTGCAAG ATCATGGACA TGGCGATGAA GGTCGGCGCG CCGGTGATCG GCCTCAACGA TTCGGGCGGC GCCCGCATCC AGGAGGGCGT CGCCTCGCTG GGCGGCTATG CCGAGGTGTT CCAGCGCAAC ATCCTGGCGT CGGGCGTGAT CCCGCAGATC AGCGTGATCA TGGGCCCCTG CGCGGGCGGC GCGGTCTATT CGCCGGCGAT GACCGACTTC ATCTTCATGG TGAAGGACAG CTCGTTCATG TTCGTCACCG GCCCCGACGT GGTCAAGACC GTCACCAACG AGGTGGTGAC GCAGGAGGAG CTGGGCGGCG CCGTCACCCA CACCACCAAG ACCTCGGTCG CGGACAACGC CTTCGACAAC GACATCGAGG CGCTGCTGTC GGTGCGCGAG TTCGTCGACT TCCTGCCGCT GTCGAACCGG CACGACCTGC CCGAGCGGCC GACCGACGAC CCCTGGGACC GCGCCGAGCC GAGCCTCGAC ACGCTGATCC CCGACAGCGC GACCAAGCCC TACGACATGA AGGAGCTGAT CGCGAAGGTC GTCGACGAGG GCGACTTCTT CGAGGTGCAG CCGAACCATG CCGGCAATAT CGTGATCGGC TTCGGCCGGA TCGAGGGCCG CCCGGTCGGC ATCGTCGCCA ACCAGCCGAT GGTGCTGGCC GGCTGTCTCG ACATCAACTC GTCGAAGAAG GCGGCGCGCT TCGTCCGCTT CTGCGACGCG TTCGACATCC CGATCGTCAC CTTCGTCGAC GTGCCCGGCT TCCTGCCCGG CACCGCGCAA GAGCATAACG GCATCATCAA GCATGGCGCC AAGCTGCTGT TCGCCTATGG CGAGGCGACC GTCCCGAAGA TCACCGTCAT CACCCGCAAG GCCTATGGCG GCGCCTATGA CGTGATGGCG TCGAAGCATC TGCGCGGCGA CCTCAACTAT GCCTGGCCGA CCGCCGAGAT CGCGGTGATG GGCGCCAAGG GCGCGGTCGA GATCATCTTC CGCAAGGACA TCGGCGACGC CGCGAAGATC GCCGAGCGCA CCAGGGAATA TGAGGACCGC TTCGCCAACC CGTTCGTGGC GGCGTCGAAG GGCTTCATCG ACGAGGTGAT CATGCCGCAT TCGACCCGCC GGCGGATCGC GCTCGGCCTG CGCAAGCTGC GCAACAAGAG CCTCGAGAAT CCCTGGAAGA AGCACGACAA CATTCCCTTG TGA
|
Protein sequence | MLAILQKLEE KRAAARLGGG EKRIEAQHRK GKLTARERIE VLLDADSFEE LDMYVEHNCT DFGMEAEHIP GDGVVTGSGT VNGRLVFVFS QDFTVYGGAL SERHAQKICK IMDMAMKVGA PVIGLNDSGG ARIQEGVASL GGYAEVFQRN ILASGVIPQI SVIMGPCAGG AVYSPAMTDF IFMVKDSSFM FVTGPDVVKT VTNEVVTQEE LGGAVTHTTK TSVADNAFDN DIEALLSVRE FVDFLPLSNR HDLPERPTDD PWDRAEPSLD TLIPDSATKP YDMKELIAKV VDEGDFFEVQ PNHAGNIVIG FGRIEGRPVG IVANQPMVLA GCLDINSSKK AARFVRFCDA FDIPIVTFVD VPGFLPGTAQ EHNGIIKHGA KLLFAYGEAT VPKITVITRK AYGGAYDVMA SKHLRGDLNY AWPTAEIAVM GAKGAVEIIF RKDIGDAAKI AERTREYEDR FANPFVAASK GFIDEVIMPH STRRRIALGL RKLRNKSLEN PWKKHDNIPL
|
| |