| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2891 |
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| Symbol | |
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| ID | 5199888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3177252 |
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| End bp | 3179402 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582441 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001263381 |
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| Protein GI | 148555799 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.17991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG ACAAGCCCGA TCTGGCCCGC TGGGAGGCCG CCGCCGCCAA GGAGGTCAAG
GGCAAGGACC TGACCTGGAA CACGCCCGAG GGGATCGCGG TCAAGCCGCT CTACACCGCT
GCGGACGTGG CCGGCATCGA CCCCGGCCTG CCCGGCTTCG CGCCGTTCAC GCGCGGGGTG
CGCGCATCGA TGTATGCCGG CCGTCCCTGG ACGATCCGCC AATATGCCGG CTTCTCGACC
GCCGAGGAAT CGAACGCCTT CTACCATCGC AACCTCAAGG CCGGGCAGAA GGGCCTGTCG
GTCGCCTTCG ACCTGGCGAC CCATCGCGGC TATGACAGTG ACCACCCGCG CGTCACCGGC
GACGTCGGCA AGGCGGGCGT GGCGATCGAC ACGATCGACG ACATGAAGAT CCTGTTCGAC
GGCATCCCGC TCGACCAGAT GTCGGTGTCG ATGACGATGA ACGGCGCGGT GATCCCGGTG
CTCGCCTTCT TCATCGTCGC GGGCGAGGAG CAGGGCGTGC CGATGGCCCA GCTCGACGGG
ACCATCCAGA ACGACATCCT CAAGGAGTTC ATGGTCCGCA ACACCTATAT CTACCCGCCC
GAGCCGAGCA TGCGGATCAT CTCGGACATC TTCGCCTTCA CGAGCGCGAA CATGCCCAAG
TTCAACTCGA TCTCGATCTC GGGCTATCAC ATGCAGGAAG CCGGGGCGAC GCAGGTCCAG
GAGCTGGCCT TCACCATCGC CGACGGCATG GAATATGTGA AATACGGCGT CGCCTCGGGC
CTCGACATCG ACAAGTTCGC CGGGCGCCTC AGCTTCTTCT TCGCGATCGG CATGAACTTC
TTCATGGAGA TCGCCAAGCT GCGCGCCGCG CGGGTGCTGT GGCACCGGGT GATGACGAAG
CTCGGCGCCA GGGACGAGCG CTCGAAGATG CTGCGCACCC ATTGCCAGAC CTCGGGCGTC
TCGCTGACCG AGCAGGACCC GTACAACAAC GTCATGCGCA CCACGATCGA GGCGATGGCG
GCGATGCTGG GCGGCACCCA GTCGCTCCAC ACCAATGCGC TCGACGAGGC GATCGCGCTG
CCGACCGACT TCTCCGCCCG GATCGCGCGC AACACCCAGA TCGTCATCCA GGAAGAGACC
GGGATGACCA AGGTCGTCGA TCCGCTCGGC GGCTCCTATT ATGTCGAGAG CCTGACCCGG
GAGCTGGTCG ACCGCGCCTG GGAGATCATC GAGAAGGTCG AGGCCGAGGG CGGCATGGCG
AAGGCCGTGG CGGCCGGCTG GCCCAAGGCG ATGATCGAGG AGGCCTCGGC CGCCAAGGCG
GCGCGGATCG ACCGCGTCGA GGAGGTGATC GTCGGCGTCA ACAAGTACAA GCTGGCGCAG
GAAGACCCGA TCGACATCCT CGACGTCGAC AATGTCGCGG TGCGCGAGGC GCAGATCCGC
CGCATCCAGG CGGTCAAGGC CGGCCGCGAC GAGGCGACGT GCCAGGCGGC GCTCGCGGCG
CTGACCGAAG GCGCGCAGGG CAGCGCGAAC CTGCTCGCCC TTGCCGTCGA CTGCGCCCGC
GCCCACGCGA CGCTGGGCGA GATCTCGGCG GCGATGGAGG CGGTGTTCGG CCGCTTCGGC
ACCAACCCGA CCCCGGTCAA AGGCATCTAT GGCGGCGCCT ATGGCGACGA TCGCCGCTGG
GCGGGGCTGG TCGACGGGGT CGAGACGATC ACCCGGCGCA AGGGCCGCAA GCCCCGCATG
CTGGTCGCCA AGATGGGCCA GGACGGGCAC GACCGCGGCG CCAACCTCGT CTCCTCGGCG
TTCGGCGACC TCGGCTTCGA GGTGGTGGCG GGGCCGCTGT TCCAGACCCC GAAGGAAGCC
GCCGAGCTGG CGCTCAAGGC CGATGTCGAC GTGGTCGGCG CGTCCAGCCT CGCCGCCGGC
CACAAGACGC TGATCCCCGA GCTGATCCAG CACCTCAAGG ATGCCGGGCG CGGCGACATC
AAGGTGGTCG CCGGCGGCGT CATCCCGGCG CAGGATTATC AGTTCCTCCG CGACGCGGGG
GTGCAGGGGA TTTTCGGCCC CGGCACGAAT CTCGTCAACG CGGCCACCGA AGTGCTACGG
CTGTTGGGTC ACAACCAACC GCCCGAAGGC TTCGAGGAGG CCGCTGAATG A
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| Protein sequence | MSDDKPDLAR WEAAAAKEVK GKDLTWNTPE GIAVKPLYTA ADVAGIDPGL PGFAPFTRGV
RASMYAGRPW TIRQYAGFST AEESNAFYHR NLKAGQKGLS VAFDLATHRG YDSDHPRVTG
DVGKAGVAID TIDDMKILFD GIPLDQMSVS MTMNGAVIPV LAFFIVAGEE QGVPMAQLDG
TIQNDILKEF MVRNTYIYPP EPSMRIISDI FAFTSANMPK FNSISISGYH MQEAGATQVQ
ELAFTIADGM EYVKYGVASG LDIDKFAGRL SFFFAIGMNF FMEIAKLRAA RVLWHRVMTK
LGARDERSKM LRTHCQTSGV SLTEQDPYNN VMRTTIEAMA AMLGGTQSLH TNALDEAIAL
PTDFSARIAR NTQIVIQEET GMTKVVDPLG GSYYVESLTR ELVDRAWEII EKVEAEGGMA
KAVAAGWPKA MIEEASAAKA ARIDRVEEVI VGVNKYKLAQ EDPIDILDVD NVAVREAQIR
RIQAVKAGRD EATCQAALAA LTEGAQGSAN LLALAVDCAR AHATLGEISA AMEAVFGRFG
TNPTPVKGIY GGAYGDDRRW AGLVDGVETI TRRKGRKPRM LVAKMGQDGH DRGANLVSSA
FGDLGFEVVA GPLFQTPKEA AELALKADVD VVGASSLAAG HKTLIPELIQ HLKDAGRGDI
KVVAGGVIPA QDYQFLRDAG VQGIFGPGTN LVNAATEVLR LLGHNQPPEG FEEAAE
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