Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2887 |
Symbol | |
ID | 5199250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3171747 |
End bp | 3173204 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582437 |
Product | glucose-6-phosphate 1-dehydrogenase |
Protein accession | YP_001263377 |
Protein GI | 148555795 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.375097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGTCAC CGAGCGAGAA GCTGCTGTTG TTTGGTGCGA CGGGAGACCT GTCGCAGCGG ATGCTGCTGC CGTCGCTGTA CGGGCTGGCG GCGGATGGGC TGCTGCCGTC GGGTCTGGCG ATCGTGGGGA CGGCGCGCAG CGGGCATGAC GACGCGGCGT TCCGGGGGTT CGTCGAGCAG GCGCTGCGCC GCTTCGTGCC GGCCGAGCGG CTCGACGAGG CGGCGCTGGG CGGCTTCCTC GCGCGGGTCG GCTATGTCCC GGTCGACGCC TCGAAGGAGG GCGACTTCGC CGCGCTCGCG GAGAAGGTCG GGTCGACCGA GCGGGGGCTG TCGATCTTCC TGTCGACCGC GCCGTCGCTG TTCGGGGCGA CGATCGACGG TCTCGCCAAG GCGGGGCTGG CGGGCGAGGG GGTGCGGATC GGGCTGGAGA AGCCGCTCGG CTACGACATG GCGTCGAGCC GCGAGATCAA CGACGCGGTC GGATCGGTCT TCCCCGAGGA GCGGATCTTC CGGATCGACC ATTATCTGGG CAAGGAGACG GTCCAGAACC TGCTGGCGCT GCGCTTCGCC AACGGGCTGT TCGAGCCGCT GTGGCGCGAG GGCGGGATCG ACCATGTCCA GATCACCGTG TCGGAGACGG TCGGGCTGGA GGGCCGGGTC GGCTTCTACG ACGGGGCGGG GGCGCTCAGG GACATGGTGC AGAACCACAT GCTCCAGCTG CTGGCGCTGG TGGCGATGGA GCCGCCGGCG CGGTTCGACG CGGCGGCGGT GCGCGACGAG AAGGTGAAGG TGTTCCGCTC GCTGCGCCCG ATCGACCGGG CGACGGCGGC GAGCCACAGC GTGATCGGGC AATATGGCGC CGGCGCGGTG GCGGGTGGTC CGGTGCCGGG CTATGTCGAC GAGCTGGGCA AGTCGTCGGA CACCGAGACC TTCGTCGCGC TGAAGGCGAA CATCGACAAT TGGCGGTGGA AGGGGGTTCC CTTCTACCTG CGCACGGGCA AGCGGCTGCC GAGCCGTCAG TCAGAGATCT TCATCCAGTT CAAGGGCGTG CCGCACTCGA TCTTCGACGG GCGGGGCGCG GTGCTGCAAC CCAACAAGCT GATCATCCGT TTGCAGCCCG ACGAGAATGT CCGGCTGCTG CTGATGGCGA AGGAGCCGGG GCTCGACCGC GACGGGATCA GGCTGAGGGA GGTGCCGCTC GACATATCGA TGCCGAACGC CTTCGCCGAC AGCCGGCGGC GGATCGCCTA TGAGCGGCTG CTGCTCGACC TGGTCGAGGG CGACCAGACG CTGTTCGTGC GGCGCGACGA GGTCGAGGCG CAATGGGAAT GGGTCGACGC GATCCGCGAC GGCTGGGCCG CCAATGCCAT GAAGCCCAAG CCCTATATGG CCGGTACATG GGGCCCCTCC GCCGCCATCG CCCTCACCGA ACGCGACCGC GTCACGTGGC ATGATTGA
|
Protein sequence | MTSPSEKLLL FGATGDLSQR MLLPSLYGLA ADGLLPSGLA IVGTARSGHD DAAFRGFVEQ ALRRFVPAER LDEAALGGFL ARVGYVPVDA SKEGDFAALA EKVGSTERGL SIFLSTAPSL FGATIDGLAK AGLAGEGVRI GLEKPLGYDM ASSREINDAV GSVFPEERIF RIDHYLGKET VQNLLALRFA NGLFEPLWRE GGIDHVQITV SETVGLEGRV GFYDGAGALR DMVQNHMLQL LALVAMEPPA RFDAAAVRDE KVKVFRSLRP IDRATAASHS VIGQYGAGAV AGGPVPGYVD ELGKSSDTET FVALKANIDN WRWKGVPFYL RTGKRLPSRQ SEIFIQFKGV PHSIFDGRGA VLQPNKLIIR LQPDENVRLL LMAKEPGLDR DGIRLREVPL DISMPNAFAD SRRRIAYERL LLDLVEGDQT LFVRRDEVEA QWEWVDAIRD GWAANAMKPK PYMAGTWGPS AAIALTERDR VTWHD
|
| |