| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2868 |
|---|
| Symbol | |
|---|
| ID | 5199751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3148925 |
|---|
| End bp | 3150001 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640582418 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263358 |
|---|
| Protein GI | 148555776 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.838475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0422213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAT CCGAAGAACC GCGGCGTTTC CGTTTCGAGG ACGGCAGCTT CCTCGCCCTC
GTCCTGATCG TCACGGTTGC TTTCGCGATG GTGATCGCGC CCTTCTTCGG CGCGATCCTC
TGGGGGCTCG TCCTCGCGCT GATGTTCAGC CCGGTCCACC GCCGCATCCT CGACCGGATG
CCGGGCCGCT CGAACGTCGC GGCGCTGATC ACCCTGCTGA TCATCATCCT GATCGTGATC
CTGCCCGCCG CCTTCCTCGG ATCGGCGATG ATCCAGGAAT TCCTGCATGT CTACGCGATG
GTCCAGTCGG GCCAGATCGA CATCGCCCGG ATGTTCGAGC AGATGACCGG CGCGCTGCCC
GACTGGGCGT CCCATTGGCT GGCGGCGCGC GGCCTGACCG ATTTCGCCGC CGCGCGGCAA
CAGATCAGTG AGACGCTCAG CGGCAGCTTC AGCGCGATCG CCGCCCATGC GCTGCAGGTC
GGGCAGGGGG CGCTCAACCT CGTCCTGATG CTGGGCGTGA TGCTCTACCT GACCTTCTTC
CTGATCCGCG ACGGCGAGGA ACTGGCGCGC CGGGTGATCG AATCGATCCC GCTCGATCCC
GACCGGCGGC GCGCGGTGAT CCGCAACTTC ACCGTCGTCA CCCGCGCGAC GATCAAGGGC
AGCCTGATCG TCGCGATCGT CCAGGGCTTC ACCGGCGGCG TCACCTTCGC GCTGCTCGGC
ATCGAAGGGG CGCTGCTGTG GGGGACGATG ATGGCGATCT TCTCGCTGAT CCCGGCGATC
GGCTGCGGCA TCGTCTGGGT GCCGGTCGCG CTCTACCTGT TCGCCACCGG CGCGGTGGTG
AAGGGGATCA TCCTGGTCGT CGCGGGTGCG CTGGTGATCG GATCGATCGA CAATGTGCTG
CGCCCGCTGC TGGTCGGCCG CGACACCCGC ATGCCCGATT ATGTCGTGCT GATCTCGACG
CTGGGCGGGC TCCAGCTCTT CGGTTTCCAC GGCTTCATCG TCGGGCCGGT GGTCGCTGCG
TTGTTCATCG GCACCTGGAA CATCGTCACC GAGCAGCGCC GCGCCGCGAG CCGCTGA
|
|---|
| Protein sequence | MSESEEPRRF RFEDGSFLAL VLIVTVAFAM VIAPFFGAIL WGLVLALMFS PVHRRILDRM
PGRSNVAALI TLLIIILIVI LPAAFLGSAM IQEFLHVYAM VQSGQIDIAR MFEQMTGALP
DWASHWLAAR GLTDFAAARQ QISETLSGSF SAIAAHALQV GQGALNLVLM LGVMLYLTFF
LIRDGEELAR RVIESIPLDP DRRRAVIRNF TVVTRATIKG SLIVAIVQGF TGGVTFALLG
IEGALLWGTM MAIFSLIPAI GCGIVWVPVA LYLFATGAVV KGIILVVAGA LVIGSIDNVL
RPLLVGRDTR MPDYVVLIST LGGLQLFGFH GFIVGPVVAA LFIGTWNIVT EQRRAASR
|
|---|
| |