| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2835 |
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| Symbol | rho |
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| ID | 5197760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3117900 |
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| End bp | 3119156 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640582386 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001263326 |
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| Protein GI | 148555744 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.182498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTGA AGGACCTCAA GAAGAAGAGC CCCGCCGACC TCGTCAGCAT GGCCGAAGAA
CTCGGCGTCG AGGGCGCGTC GACGATGCGC AAGCAGGACC TGATGTTCGC GATCCTCAAG
GTCGAGGCGG AAAATGGCGA GCAGATCATG GGCGAGGGCA CGATCGAGGT GCTGCCCGAC
GGCTTCGGCT TCCTGCGCAG CCCCGAGGCG AACTATCTCG CCGGTCCCGA CGACATCTAC
GTCTCGCCCA ACCAGGTGCG GAAGTTCGGC CTGCGCACCG GCGACACCGT CGAGGGCGAG
ATTCGTGCGC CCAAGGACGG CGAGCGCTAT TTCGCGCTGA CCCGGCTCGC GTCGATCAAC
TTCGACGATC CCGACGTCGT CCGTCACCGC GTCAATTTCG ACAATCTCAC GCCGCTCTAT
CCCGAAGAGA AGCTGCGGCT CGACACGCTC GACCCGACCG TCAAGGACAA GTCGGCGCGC
GTCATCGACA TCGTCTCGCC GCAGGGCAAG GGCCAGCGCG CGCTGATCGT CGCGCCGCCG
CGCGTCGGCA AGACGGTGCT GCTCCAGAAC ATCGCCAAGG CGATCACCGA CAACCATCCC
GAGGTGTTCC TGATCGTGCT GCTGATCGAC GAGCGGCCCG AGGAAGTCAC CGACATGCAG
CGCTCGGTGA ACGGCGAGGT GATCAGCTCG ACCTTCGACG AGCCGGCGCA GCGCCACGTC
CAGGTCGCCG AGATGGTGAT CGAGAAGGCC AAGCGCCTCG TCGAGCACAA GAAGGACGTG
GTGATCCTGC TCGACTCGAT CACCCGCCTC GGCCGCGCCT ACAACACCGT CGTCCCTTCG
TCGGGCAAGG TGCTGACCGG CGGCGTCGAC GCCAATGCGC TGCAGCGGCC GAAGCGCTTC
TTCGGCGCCG CGCGCAACAT CGAGGAGGGC GGCTCGCTCT CGATCATCGC CACCGCGCTG
ATCGACACCG GCAGCCGCAT GGACGAGGTG ATCTTCGAGG AGTTCAAGGG CACCGGCAAC
TCCGAGATCG TGCTCGACCG CAAGGTCGCC GACAAGCGCA TCTTCCCGGC GATGGACGTC
GGCAAGTCGG GCACCCGCAA GGAAGAGCTG CTGGTCGACA AGGGCAAGCT GTCGAAGATG
TGGGTGCTTC GCCGCATCCT CATGCAGATG GGCACCGTCG ACGCGATGGA GTTCCTGCTC
GACAAGATGA AGGATTCGAA GACCAACGAG GATTTCTTCG ACTCGATGAA CCAGTAA
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| Protein sequence | MHLKDLKKKS PADLVSMAEE LGVEGASTMR KQDLMFAILK VEAENGEQIM GEGTIEVLPD
GFGFLRSPEA NYLAGPDDIY VSPNQVRKFG LRTGDTVEGE IRAPKDGERY FALTRLASIN
FDDPDVVRHR VNFDNLTPLY PEEKLRLDTL DPTVKDKSAR VIDIVSPQGK GQRALIVAPP
RVGKTVLLQN IAKAITDNHP EVFLIVLLID ERPEEVTDMQ RSVNGEVISS TFDEPAQRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL GRAYNTVVPS SGKVLTGGVD ANALQRPKRF
FGAARNIEEG GSLSIIATAL IDTGSRMDEV IFEEFKGTGN SEIVLDRKVA DKRIFPAMDV
GKSGTRKEEL LVDKGKLSKM WVLRRILMQM GTVDAMEFLL DKMKDSKTNE DFFDSMNQ
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