Gene Swit_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2774 
Symbol 
ID5196925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3066558 
End bp3067337 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID640582327 
Producthypothetical protein 
Protein accessionYP_001263267 
Protein GI148555685 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG ACACCACGAT CCTCCACGAT CCGATGTTCT GGCTGCTGGG CATCCCGGCG 
GTCGTCCTGC TCGGCCTCGG CAAGGGAGGC TTCATCGGCT TCAGCACGCT GGCGATGCCG
CTGGTCGCGA TGGCGGTGCC GCCGGTGCAG GCGGCGGCGA TCCTGCTACC GCTGATGATC
GCGCAGGACG CGGTCGGCGT CTGGGCGTTC CGCCGCAGCT GGGACCGGCA CGTCATGCTG
GTGATGCTGC CCGGCGCGGT GCTCGGCATC CTGCTCGGCT ATGTCTTCGC CGCCAGCCTG
CCCGAGGCCT GGATATTGCT GGCGCTCGGG CTGATCTCGA TCCTGTTCGG CGCGCAGCGG
CTGTGGGTCG AGCGCGGCGG CACCCCCGCC CCCGCCCGGG TGCTGCCCGA CTCGGTGGGT
TTCCTGTGCG CGACCGCCTC GGGGCTGACC AGCCAGATCG CCCATGCCGG CGCCCCGCCC
TACCAGCTCT GGGTCTTTCC GCAGAAGCTG CCGCGCGACG TGCTGGTCGG CACCACCGCG
ATCTTCTTCG CGCTGATGAA CTGGATCAAG GTGCCCGCCT ATGTCGCTCT CGGCCAGTTC
ACCCCGGTCA ACCTGCTCGC CTCGGCGGCG CTGCTGCCGA TCGCGACCCT GTCGACCTTC
GCGGGGGTGC GGCTGGTGCG GCGGATCGAT CCCGAGCGCT TCTATGTGAT GGTCTACGGG
CTGACCATGC TGGTCGGGGT CAAGCTGAGC TGGGACGCGG TGAGCCGGCT GGCGGGGTGA
 
Protein sequence
MTVDTTILHD PMFWLLGIPA VVLLGLGKGG FIGFSTLAMP LVAMAVPPVQ AAAILLPLMI 
AQDAVGVWAF RRSWDRHVML VMLPGAVLGI LLGYVFAASL PEAWILLALG LISILFGAQR
LWVERGGTPA PARVLPDSVG FLCATASGLT SQIAHAGAPP YQLWVFPQKL PRDVLVGTTA
IFFALMNWIK VPAYVALGQF TPVNLLASAA LLPIATLSTF AGVRLVRRID PERFYVMVYG
LTMLVGVKLS WDAVSRLAG