Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2757 |
Symbol | |
ID | 5199464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3046625 |
End bp | 3047359 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582310 |
Product | hypothetical protein |
Protein accession | YP_001263250 |
Protein GI | 148555668 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.128442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCT ATCTCACCCG GCCCGACCAG CCCGCGCTCG CCTATCGCTA TCGCCCCGGA CGCGGGCCGA CGATCGTCTT CCTGCCCGGC TACCGTTCCG ACATGGAGGG CGAGAAGGCG ACCGCGCTCG ACGCCTGGGC GGGGCGCGAG GGGCGGGCGA TGCTGCGGCT CGACTATTCG GGCTGCGGCG CGAGCGAGGG CGCGTTCGAG GATTTCACCC TGGCCGACTG GCGCGACGAC GTGCTGGCGA TGATCGGCGC CTTCGCGCCC GCAGGGCCGC TGATCCTGGT CGGGTCGTCG ATGGGCGGCT GGCTGGCGCT GCTCGTCGCG CTGGCGCTGC CGGGGCGGGT GCAGGCGATC GTCGGCATCG CCGCCGCGCC CGACTTCACC GACTGGGGCT TCTCCGCCGA CGTCGTCGAG CTGCTCCGCC GCGAGGGGCG GATCGCCGAG CCGAGCGACT ATTCGGACGA GCCCTATGTC ACCACGCTCG GCTTCTGGGA ATCCGGGCAG GCGAACCTGC TGCTCGACGG CGCGATCGGC TTCGACGGGC CGGTGCGGCT GCTTCATGGC GAGCGCGACG ACACGGTGCC GGTGTCGATC GCGCTGCGGC TGGGCAGGGC GCTCCGTTCA GGCGACGTGC AGACGATCCT GATCAAGGAA GGCGACCACC GCCTGTCGCG GCCGGGCGAC ATCGCCCTGC TGATCGCGAC GGTGGCCCGC CTGATGGAGC CCTGA
|
Protein sequence | MTAYLTRPDQ PALAYRYRPG RGPTIVFLPG YRSDMEGEKA TALDAWAGRE GRAMLRLDYS GCGASEGAFE DFTLADWRDD VLAMIGAFAP AGPLILVGSS MGGWLALLVA LALPGRVQAI VGIAAAPDFT DWGFSADVVE LLRREGRIAE PSDYSDEPYV TTLGFWESGQ ANLLLDGAIG FDGPVRLLHG ERDDTVPVSI ALRLGRALRS GDVQTILIKE GDHRLSRPGD IALLIATVAR LMEP
|
| |