| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2742 |
|---|
| Symbol | |
|---|
| ID | 5196990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3027641 |
|---|
| End bp | 3028738 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640582295 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263235 |
|---|
| Protein GI | 148555653 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0803519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CGGCCGACTT CCGCTACGAT CAGCAGGTGC TGCATTTCAC CGGCGCGCTC
ACGCTCGCCC GCATCGGCGA CCTGTCGCGG CGGCTGGAAG CGCTGGACGA GGTGCCGCGC
ACGATCGACC TGGGCGAGGT CGACCGGATC GACACGGTCG GCGCCTGGCT GGTCCATCGC
ATCGCCCGCG AGCACGACGT CGAGATCGTC GGCGCCGATG CCGACGTCTG CCAGCTGATC
GAGCAGATCG CCGAAGCCGA CAAGCCGCTC AAGATCCGCC CCGATTCGAG CCCGCCCTTC
TTCCGCGTGC TGCGCGAGAT CGGCGATGCG ACCTCGGCCG CCGCCCATTC GCTCGCCGGG
CTGATCGGCT TCTTCGGCGC GACGCTGATC GGGCTGTGGG GGCTCGTCAC CCATCCGCGC
CGCTTCCGCT ACAATGCGAT GGCGCGCCAA TTCGAGGTGG TCGGCGTCAA GGCGCTGGCG
ATCATCGGGC TGATGAGCTT CCTGATCGGC ATCGTCATCG CCCAGCAGGG CGCGGTCCAG
CTCCGCCAGT TCGGCGCAGA GGTGTTCGCG GTCAACCTGA TCGGCCGCAT CACCCTGCGC
GAGCTGGGCG TGCTGATGAC CGCGATCATG GTCGCCGGCC GGTCGGGCAG CGCCTTCGCC
GCCCAGCTCG GCTCGATGAA GCTGGCCGAG GAGGTCGACG CGATGCGCAC GATCGGCGTG
TCGCCGATGG AGGCGCTGAT CCTGCCGCGC GTGCTGTCGA CGGTGGTGCT GATGCCGCTG
CTCGGCTTCT ACGCGGCGGT GATCGCGATC ATCGGCGGCG GCATCTTCTG CTGGATCGAC
CTCGACATCC CGCCGATCAC CTATGTCCAG CGCATCCGCG AGGTGGTGCC GATGACCGAC
CTGTGGGTCG GCCTGATCAA GGCGCCGGTG TTCGGCATGC TGATCGCGCT GTGCGGCTGC
TACCAGGGGA TGCAGGTCGA GGGGAATGCC GAGGAGGTCG GCCTGCGCAC CACCGCCTCG
GTCGTCCAGG CGATCTTCCT GGTCATCGTC CTCGACGCGG TGTTCGCGGT GTTCTTCAGC
TCGATCGGGT GGATCTGA
|
|---|
| Protein sequence | MTAPADFRYD QQVLHFTGAL TLARIGDLSR RLEALDEVPR TIDLGEVDRI DTVGAWLVHR
IAREHDVEIV GADADVCQLI EQIAEADKPL KIRPDSSPPF FRVLREIGDA TSAAAHSLAG
LIGFFGATLI GLWGLVTHPR RFRYNAMARQ FEVVGVKALA IIGLMSFLIG IVIAQQGAVQ
LRQFGAEVFA VNLIGRITLR ELGVLMTAIM VAGRSGSAFA AQLGSMKLAE EVDAMRTIGV
SPMEALILPR VLSTVVLMPL LGFYAAVIAI IGGGIFCWID LDIPPITYVQ RIREVVPMTD
LWVGLIKAPV FGMLIALCGC YQGMQVEGNA EEVGLRTTAS VVQAIFLVIV LDAVFAVFFS
SIGWI
|
|---|
| |