Gene Swit_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2728 
Symbol 
ID5197944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3010797 
End bp3011651 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID640582282 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_001263222 
Protein GI148555640 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.264466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.383268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC TCGACAGCGT CCGCAAGAAG ATCCCGTTCA TCGCCAAGCG CGAGAGCCCG 
GACAATCTCT GGCACAAATG CCCGTCGTGC CAGCAGATGA TCTTCGCCAA GGAATATGAG
GAGAATCTGT CGGTCTGCCC GAAATGCGGC CATCACGGCC GGATCGGCCC CGACGCGCGC
TTCGACCAGC TGTTCGACGG CGGCGTCTAC ACGCTGCTGC CCGCCCCGCA GGTGCGCGAG
GACCCGCTCA AGTTCCGCGA TTCGAAGCGC TACACCGACC GCATGAAGGA AGCGCGCGCC
AAGACCGGCG AGCAGGACGC GCTGATCAAC GCGCGCGGCA CGATCGAGGG ATTCAAGGCG
GTCGTCGGGG TGCAGGACTT CGCCTTCATG GGCGGGTCGA TGGGCCTCGC GGTCGGCGCC
GCCTTCGTCG CGGGCGTCCA GGCGGCGATC GCCGACCAGT GCCCTTACGT CATCTTCACC
GCGGCGGGCG GCGCGCGCAT GCAGGAGGGC ATCCTCTCGC TGATGCAGAT GCCCCGGACC
ACCGTCGCCA TCGCCCAGCT CCGCGAGGCC GGCCTGCCCT ATATCGTCGT GATGACCGAT
CCGACGACCG GCGGCGTCAC CGCCTCCTAC GCGATGCTCG GCGACATCCA GATCGCAGAG
CCGGGCGCGC TGATCGGCTT CGCCGGCCAG CGCGTGATCG AGCAGACGAT CCGCGAGAAG
CTGCCCGAGG GCTTCCAGCG CGCCGAATAT CTGCTCGAGC ACGGCATGCT CGACATGGTC
GTCAAGCGCC ACGACCTGCG CGCCGAGCTG GCGCGGCTGA TCGACTATCT CTGCCCGGGG
AAGAAGGCGG CCTAG
 
Protein sequence
MSWLDSVRKK IPFIAKRESP DNLWHKCPSC QQMIFAKEYE ENLSVCPKCG HHGRIGPDAR 
FDQLFDGGVY TLLPAPQVRE DPLKFRDSKR YTDRMKEARA KTGEQDALIN ARGTIEGFKA
VVGVQDFAFM GGSMGLAVGA AFVAGVQAAI ADQCPYVIFT AAGGARMQEG ILSLMQMPRT
TVAIAQLREA GLPYIVVMTD PTTGGVTASY AMLGDIQIAE PGALIGFAGQ RVIEQTIREK
LPEGFQRAEY LLEHGMLDMV VKRHDLRAEL ARLIDYLCPG KKAA