| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2727 |
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| Symbol | trpA |
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| ID | 5197943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3009985 |
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| End bp | 3010800 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640582281 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001263221 |
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| Protein GI | 148555639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.186329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.556973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC TCGCCGAGAC CTTCGCCCGC ACCCGCGCCG AGGGGCGGGC CGCGCTCGTC
ACCTTCGTCA CCGGCGGCGA TCCGACCCCC GGCGACATGG GACCGATCCT CGACGCGCTG
GTCGCGGGCG GCGCCGACGT GATCGAGCTG GGCATGCCCT TCACCGATCC GATGGCCGAC
GGCCCGGCGA TCCAGCGCGC CAACCTCCGC GCGCTCGGCG CGGGGACGAC CACCGCCGAC
CTGCTGGCGA TCGCCGCCGC CTTCCGCCAG CGCCACCCCT CGGTGCCGCT GGTGCTGATG
GGCTATGCCA ATCCGATGGT CCGGCGCGGC CCCGAATGGT TCGCCGCCGA GGCCGCCAAG
GCCGGGGTCG ACGGGGTAAT CTGCGTCGAC ATCCCGCCCG AGCAGGACGG CGCGCTCGGC
CCGGCGCTGC GCGCGGCCGG GGTCGCCCCG ATCCGCCTCG CCACCCCGAC CACCGACGCC
GCCCGGCTGC CGGCGGTGCT GGAGGGCGCG TCGGGCTTCC TCTATTATGT CTCGGTGGCG
GGGATCACCG GCATGCAGCA GGCCGGACAG GCCAGCATCG AGGCGGCGGT CGCGCGCTTC
AAGGCGGCGA CCGACCTGCC GGTCGCGGTC GGCTTCGGTG TGCGCGGGCC CGAGCAGGCC
GAGGCGATCG GCCGCGTCGC CGACGGCGTC GTCGTCGGTT CGGCGATCGT CGACCTGATC
GGCGAGCATG GCGCCGCCGC CGCGGGCCCG GTCCGCGATT TCACCGCCAC CCTCAGCGCG
GCGCTGCGCC GCGCCGCCCA GGAGAAGGCC GCATGA
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| Protein sequence | MTRLAETFAR TRAEGRAALV TFVTGGDPTP GDMGPILDAL VAGGADVIEL GMPFTDPMAD
GPAIQRANLR ALGAGTTTAD LLAIAAAFRQ RHPSVPLVLM GYANPMVRRG PEWFAAEAAK
AGVDGVICVD IPPEQDGALG PALRAAGVAP IRLATPTTDA ARLPAVLEGA SGFLYYVSVA
GITGMQQAGQ ASIEAAVARF KAATDLPVAV GFGVRGPEQA EAIGRVADGV VVGSAIVDLI
GEHGAAAAGP VRDFTATLSA ALRRAAQEKA A
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