Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2710 |
Symbol | |
ID | 5198870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2992805 |
End bp | 2993911 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582264 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_001263204 |
Protein GI | 148555622 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG CGGACGACAG CCGCCAGTTC ACCGTCGGCG AGGACGACCA CGGCATCCGG CTCGACCGCT GGTTCAAGCG GCACATGCCC GACACCAGCT TCAACATCGT CTCGCGCTGG GCGCGCACCG GCCAGCTCCG GGTCGACGGC AAGCGCGCCG CCCCCGGCGA CCGGATCGAG GCGGGCCAGG TCATCCGCCT GCCCCCGGCC GAGATCGCGG CGGCGGCGAC CGCCGCCAAG GCGCAACGCC CCGCCCGGCC CCGCGCGCCG CTGACCGAGG AGGAGATCGC CTTCGCCCGC AGCCTGGTGA TCCATCAGGA CCGGCAGGCG ATCGTGATCA ACAAGCCCCC CGGCCTCGCC ACCCAGGGCG GCACCAAGAC CGACATCCAT GTCGACCGGC TGCTCGACGC GCTCCAGTTC GACGCGGAGA GCCGGCCCAA GCTGGTCCAC CGCCTCGACA AGGACACGTC GGGGGTGCTG CTGCTCGCGC GCACCTCGCG CGCCGCCGCG CATTTCGCCA AGGCGTTCAG CAGCCGCACC GCGCGCAAGG TCTATTGGGC GATCGCGACC GGCGTGCCGT CGATCGACGA CGGCATGATC GAGTTGCCGA TCGCCAAGCA GCCGGGCACC GGCGGCGAGA AGATGCACGT CGACGAGAAG GAGGGCAGCC CGGCGCGGAC CCGCTACCGC GTGATCGAGC GCGCCGGCAA CCGCGCCTGC TGGGTCGAGC TGCAGCCCCA TACCGGCCGC ACCCACCAAC TCCGCGTCCA CCTCGCCGCG ATCGGCCACC CGATCGTCGG CGACGGCAAA TATGGCGGGG CCGAGGCGTT CCTGTCGGGC ACGATCAGCC GCAAGATGCA CCTTCACGCC CGCCGCCTGC GGGTCGACCA TCCCGATGGC GGCACGCTCG ACGTGATCGC CGAGCCACCC GAGCACATCA CCGATTCGCT GCGCAACCTG GGCTTCGACG AGGCCGAGGG CGACCTGCCG ATCGACGAAG TGAAATTCTC CGAGACCGCC GAGGGCAAGC GCCGCGCGCT GGCCGCCCGG GCGAAGGACG CGCGCAAGGC GCGGCGCGGC GAACGGCGCG GACGCAGCCG GGGATGA
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Protein sequence | MSGADDSRQF TVGEDDHGIR LDRWFKRHMP DTSFNIVSRW ARTGQLRVDG KRAAPGDRIE AGQVIRLPPA EIAAAATAAK AQRPARPRAP LTEEEIAFAR SLVIHQDRQA IVINKPPGLA TQGGTKTDIH VDRLLDALQF DAESRPKLVH RLDKDTSGVL LLARTSRAAA HFAKAFSSRT ARKVYWAIAT GVPSIDDGMI ELPIAKQPGT GGEKMHVDEK EGSPARTRYR VIERAGNRAC WVELQPHTGR THQLRVHLAA IGHPIVGDGK YGGAEAFLSG TISRKMHLHA RRLRVDHPDG GTLDVIAEPP EHITDSLRNL GFDEAEGDLP IDEVKFSETA EGKRRALAAR AKDARKARRG ERRGRSRG
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