| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2675 |
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| Symbol | |
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| ID | 5199846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2954970 |
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| End bp | 2957366 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582229 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001263169 |
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| Protein GI | 148555587 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA TGATCCAGCT CGATCCGGTC GCCGCCCTCA TGCTCGCGAT CATCGTCGCG
CTGTGGGTCG CGGCGGCGGT CGCGTCGATC ATCATGGGGC TGCGGCGCGA CGTGATCGCC
AAGACCCGCG CGCGCGATAT CGAGCGCCAG GGCGCGCTGC TCGCCAGCGC GCCGGCGGTT
CCCTTCCGCG TCGGGCTCGA CGGCCGGATC GGCGCCGATC CCCGGCTCGC CCACTGGCTC
GGCCTGCCCG CGCCGCCCAC GACGATCGAC GAGATGGCGG GCCAGGGCAT CGCAGGCCAG
GACGGGGGCG GCATCTCGGT CGTCGACGCC GAGGGGCTGG CCGCCGACAT CGCCGCCGCC
AACCAGGCCG GCCGGGCGTT CGAGCGGGTG CTCCGCCTCG CCGGGACCGA CCGGGTGCTG
CTCGCGCGCG GCCGGCCGTC GCCGCCCGCG ATCGGCGACG GCGTGATCGT CTGGCTGTTC
GACAATAGCG AGGCCGAGCG CGCCATCACC CGCCTGTCGG CCGAGGGCCA GGCGGTCAGC
GACGCGCTCG ACAGCTGCCT CGCGCTGATC GAGGCGGCGC CCTTCCCGAT GTGGCATCGC
GGCCCCGACC TGAAGCTGGC GCTGGTCAAC TCCGCCTATG TCGCCGCGGT CGAGGGCGAG
AGCGCCGAGG AGGTCGTGAC CGGCGGCGTC GAGCTGGTCG ATTCGGCCGA CGGCCGCACC
CCGCGCGCGA CCGCGCTGGC GGCGCGCGAC AGCGGCCGGA TCAAGACCCA TGTCGTCCCC
GTCACGCTGG GCGGCCAGCG GCGGACGATG CGGATCGTCG ACGTGCCGAT GGGCGAGCAT
GGCGTCGCCG GCTACGCCTT CGACATCCAG GACCTAGAGC AGACGCGCGG CGAGCTCGGC
CGCTTCCAGG AGGCGCAGCG CGAGCTGTTC GACCGGCTGT CGGCCGGCGT CGCCCAGTTC
GGGCCCGACC GCAGCCTGAT CTTCTGCAAC CAGCCCTTCC TGCAATTCTT CTCGCTGCTG
CCCGAATGGA TGTCCGACCA TCCCGAGTTC GACCGCGTGC TCGAACGGAT GCGCGAGACC
CAGCGCCTGC CCGAGGCGCG CGACTTCCCC GGCTGGAAGG CCGATCGCCG CGCCTGGTTC
AACGCGGTCG ACGCGGTCGA GGAGAATTGG ACGATCCCCG GCGGCCAGCA TCTGCGCGTC
GTCGCCCAGC CGCTGCCCAA TGGCGGGCTG CTGCTGTTCT TCGAGGACCG CACCGAGCAG
GTCCAGCTGT CCAGCGCGCG CGATACGCTG CTGCGCGTCC GCGCCGCGAC CTTCGAGAAT
CTGTTCGAGG CGATCGGCGT GTTCGCGTCC GACGGCCGGC TCCACATCTG GAACCAGAGC
TTCCGCGACA TATGGGGCCT GTCCGACGCC GACCTCGCCC AGAACCTCCG CGTCGACGCG
ATGGTCGAGC TGGTCGCGGC CAAGCTCGCC GATCCGTCGC GCGCGCAGCT GCTGCGCGAC
CTGGTCCGCA TCGCGACGGT CGACCGGCAG GCGCGCACCG GCCGCATGGC GCTGGCCGAC
GGCCGCTATT TCGACTTCGC GGTGGTGCCG CTGCCCGACG GCAACGCGCT GTTCACCCTG
CTCGACATCA CCGCCTCGCG CGGGATCGAG GAGGCGTTGC GCGGCCGCGC CGACGCGCTG
GAGGAGGCCG ACAAGCTCAA GACCGCCTTC GTCGCCAATA TGAGCTATGA GCTGCGCGTG
CCGCTGACCT CGATCGCGGG CTTCGCCGAG TTGCTCGACG GCGGCTATGC GGGCGAGATG
CCGCCGATCG CGCAGGAATA TGTCAAGGCG ATCCTCGCCT CGGTCGGTCG GCTCGGCTCG
CTGGTCGAGG ACGTGCTCGA CCTCACCCAG GGCGCCGCGG GCAACCTGCC GCTGTCCGAG
GAGCAGGTCG ACATGGGCGC GCTGCTCACC GGCGCGGTCG CCGCCGCCCG CCCGGCCGCC
GAGGGCAAGC CGCTCCAGCT CCTCGTCGAC GTCGAGCCGG GGCTGGGCGA GATTCGCGGC
GATCCGCGCC GGCTGCGCCA GATCGCCGAC CATCTGCTCA ACAACGCGAT CACCTACACC
CCGCCGCAGG GGCGGGTGAC GATCCGCGTC CATGGCGACG ACGACATGAT CGTCTGGGTG
GTATCCGACA CCGGCCCCGG CATGGACGCC GCCCAGCGCG CCGGCATCTT CGACGCCTAT
CCGCGCATCG ACGCGAGCAA CGACGAGGGC AAGCAGCTGA TCGGCATCGG CCTGCCGCTG
ACCCGCCAGC TGGTCGAGGC GCATGGCGGC TCGATCGCGC TGGAGAGCGA GCCCGGGCGC
GGCACCACCG TGACGATCCA CCTGCCCCGC CGCCACGGCG AGCATGGCCA TGCGTGA
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| Protein sequence | MSQMIQLDPV AALMLAIIVA LWVAAAVASI IMGLRRDVIA KTRARDIERQ GALLASAPAV
PFRVGLDGRI GADPRLAHWL GLPAPPTTID EMAGQGIAGQ DGGGISVVDA EGLAADIAAA
NQAGRAFERV LRLAGTDRVL LARGRPSPPA IGDGVIVWLF DNSEAERAIT RLSAEGQAVS
DALDSCLALI EAAPFPMWHR GPDLKLALVN SAYVAAVEGE SAEEVVTGGV ELVDSADGRT
PRATALAARD SGRIKTHVVP VTLGGQRRTM RIVDVPMGEH GVAGYAFDIQ DLEQTRGELG
RFQEAQRELF DRLSAGVAQF GPDRSLIFCN QPFLQFFSLL PEWMSDHPEF DRVLERMRET
QRLPEARDFP GWKADRRAWF NAVDAVEENW TIPGGQHLRV VAQPLPNGGL LLFFEDRTEQ
VQLSSARDTL LRVRAATFEN LFEAIGVFAS DGRLHIWNQS FRDIWGLSDA DLAQNLRVDA
MVELVAAKLA DPSRAQLLRD LVRIATVDRQ ARTGRMALAD GRYFDFAVVP LPDGNALFTL
LDITASRGIE EALRGRADAL EEADKLKTAF VANMSYELRV PLTSIAGFAE LLDGGYAGEM
PPIAQEYVKA ILASVGRLGS LVEDVLDLTQ GAAGNLPLSE EQVDMGALLT GAVAAARPAA
EGKPLQLLVD VEPGLGEIRG DPRRLRQIAD HLLNNAITYT PPQGRVTIRV HGDDDMIVWV
VSDTGPGMDA AQRAGIFDAY PRIDASNDEG KQLIGIGLPL TRQLVEAHGG SIALESEPGR
GTTVTIHLPR RHGEHGHA
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