Gene Swit_2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2664 
Symbol 
ID5198428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2942397 
End bp2943422 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID640582218 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001263158 
Protein GI148555576 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTATC GTGTCGTCGT CGCGGGTGCC ACCGGCAATG TGGGCCGCGA AATGCTGAAC 
ATCCTGGCCG AGCGCGAATT CCCGATCGCC GAGCTGGCGG CGGTGGCCTC GGCCCGCAGC
CAGGGCGACC AGATCGAGTT CGGCGAGACC GGCAAGATGC TCAAGGTCCA GAACATCGAG
CATTTCGACT GGTCGGGCTG GGACATCGCG CTGTTCGCGA TCGGCTCCGA CGCCACCAAG
ATCTACGCGC CGATCGCCGC GGCGGCGGGC TGCACCGTGA TCGACAACAG CTCGCTCTAC
CGGATGGACC CGGACGTCCC GCTGATCGTG CCCGAGGTGA ACCCCGAGGC GATCGACGGC
TACAAGGTGC GCAACATCAT CGCCAACCCG AACTGCTCGA CCGCGCAGAT GGTCGTCGCG
CTCAAGCCGC TGCACGACGC GGCGACGATC AAGCGCGTCG TCGTCTCGAC CTACCAGTCG
GTGTCGGGCG CCGGCAAGGC GGGCATGGAC GAGCTGTTCG AGCAGAGCCG CAACATCTTC
GTCGGCGACC CTGCCGAGCC GAAGAAGTTC ACCAAGCAGA TCGCGTTCAA CGTAATCCCG
CACATCGACA AGTTCCTCGA CGACGGCTTC ACCAAGGAAG AGTGGAAGAT GGTCGTCGAG
ACCAAGAAGA TCATGGACCC GAAGGTGAAG GTCACGGCGA CCTGCGTCCG CGTCCCCGTC
TTCGTCGGCC ATTCGGAAGC GATCAACATC GAGTTCGAGA AGGAGCTGTC GGCCGAGGAC
GCGCAGAAGA TCCTGCGCGA GGCGCCGGGC GTGATGCTCG TCGACAAGCG CGAGGACGGC
GGTTACGTCA CCCCGGTCGA GTGCGTCGGC GAGTTCGCGA CCTATGTCAG CCGCGTCCGC
GAGGACCCGA CCGTCGAGAA TGGCCTCGTC CTGTGGTGCG TCTCGGACAA CCTCCGCAAG
GGCGCCGCGC TCAACGCCGT CCAGATCGCC GAGCTGCTCG GCCGTCGCCA CCTCAAGAAG
GCTTGA
 
Protein sequence
MGYRVVVAGA TGNVGREMLN ILAEREFPIA ELAAVASARS QGDQIEFGET GKMLKVQNIE 
HFDWSGWDIA LFAIGSDATK IYAPIAAAAG CTVIDNSSLY RMDPDVPLIV PEVNPEAIDG
YKVRNIIANP NCSTAQMVVA LKPLHDAATI KRVVVSTYQS VSGAGKAGMD ELFEQSRNIF
VGDPAEPKKF TKQIAFNVIP HIDKFLDDGF TKEEWKMVVE TKKIMDPKVK VTATCVRVPV
FVGHSEAINI EFEKELSAED AQKILREAPG VMLVDKREDG GYVTPVECVG EFATYVSRVR
EDPTVENGLV LWCVSDNLRK GAALNAVQIA ELLGRRHLKK A