| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2621 |
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| Symbol | |
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| ID | 5199033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2903241 |
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| End bp | 2905856 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582177 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263117 |
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| Protein GI | 148555535 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC AGATCCGCAC GCTCTCGCTC ACCACCACCA TCCTCTTCGC CGGCGCCGTC
GGGATCGCCC CCGGCTCCGC CCAGGGCGTC GGGCCCGATC CGGAAGGCGG CGCGGACATC
GTGGTGACCG GATCGCGTTT CGGCAGCCGC TCGATCGCCG AGTCGCCGAC GCCGATCGAC
CATATCGGCA CCGAGGAGCT CAATCGCGGC GGCCGCGTCG AGATCCAGGA GATGCTCAAG
ACGGCGGTGC CGAGCTTCAG CACGCCGCGC CCGAACGCCT CGGGCGTCGG CGATTTCACC
ACGCCGCCGA CGCTGCGCGG CCTCTCGACC GGGCAGCTCC TCGTCCTCGT CAACGGCAAG
CGCCGCCATT CCTCGGGCGA CCTCAGCACC AGCAACGGCA TCGGCCGCGG CGACGTCGCC
TATGACTTCA ACTCGATCCC CTCGGCCGCG ATCGGCCATA TCGAGGTGCT GCGCGACGGC
GCCTCGGCCC AATATGGGTC CGACGCGATC GCCGGCGTGA TCAACCTGTC GCTCGACAAG
TCCGAAGGCG TCAGCGGCAA GGTGACCACC GGCATCACCA AGCAGGGCGA CGGCGAGTAT
GTCGACGTCG GCGCGGGCTT CGGCCTGGCG ATCGGCGACG GCGGCATCAT CCGCACCACC
GTGCAATATC AGAACCGTCG CGGCAGCAAC CGCGCCGATC CCGATACGCG CCAGCAATAT
TTCGGGACCA ACGCCGCCGG CGCGCCGACC GCGATCTCGT CCTTCTATGG CTCGGGCGTC
GGGCTGACCC CGTCGAACGG CACGCTCGAC CCGCGCGAGG CGACGGTCGA CCGCGACACC
TCCTATGAGG GGACGGCGCC GTTCACGATG AAGGCGATCT TCGTCAACAG CGAGCTGCCG
GTCGGCGACG CCGTCACCCT CTACGGCTTC GGCGGCTATA GCGACCTCGA CGGCAAGACC
GCCAATTTCT TCCGCCGCGC CGGGCAGGAC CAGACGGTGC GCTCGCTCCA TCCCGACGGC
TATGCGCCCT ATGGCGAGTT CGGGCTGCGC AACCTGTCCG CCTTCGGCGG CGCGCGCGGC
GATGACCTCG CCGGCTTCGG CTGGGACCTG TCGACCGGCT TCGGCAAGAG CCTGATCAAC
TCGGACATCA GCAATTCGAA CAATCCGTCG CTGGGCAATG CCAGCCCGAC CGAGATGCGC
ATCAGCCGCA TCCGCTTCTC GCAATGGACC ACCAACCTCG ACCTGACGCG CGAGTTCGAC
GTCGGCGACA GCACCCCGCT CAAGTTCGCG TTCGGCGGCG AATATCGCAA GGAGGTGTGG
CGCCTGCTCG CCGGCGATCC GGCCAGCTAT GTCAACGGCG GCGTCGGGAT CATCGGCGGG
CCCGCCAACG GCGCGGTCGC CCCGGTCGGC GCGCAGCCCA ATCCGGGCGT GTCGCCCGCC
GACGCGACGA CCGGAAAGCG CAACAGCAAG GCGGTCTATG GCGAGTTGGA GAAGGAGTTC
TTCGATCGCC TGACGCTCAA CGGCGCGGTC CGCTACGAGG ACTTCTCGGA CTTCGGCGAT
ACCGTCAACT ACAAGCTGTC GAGCCGGCTC AAGCTGGTCG AGGCGCTGGC GCTGCGCGGA
TCGTTCAGCA CCGGCTTCCG CGCGCCGCAT CTCGCCCAGA GCTTCTTCAA CTCGTCGCTG
ACAAACTTCA TCAACGGCGC GCCGGTGCTG ATCCGCAACT TCCCGGTCGA CAGCGCCGCG
GGCCGGCTGA TCGGCGCGAC GCCGCTCAAG CCCGAGAAGT CGAGGAACAT CTCGATCGGC
GCGGTCGCCA AGCTGTCGAG CTGGACGATC ACGCTCGACG GCTACCGGAT CAAGCTGAAG
GACCGCATCG TCCAGTCGTC GACCTTCCAG GACGCCCGGC TGACCAACCT GCTCGCGGCC
AACGGCTTCC CCGGCATCGG CGGCGCGCAA TATCTGACCA ACGCGGTCGA CTCGACCACC
CACGGCGTCG ACCTGACCGT CAGCGGCTCG ATCGACCTCG ACGATTTCGG CAAGCTCGCG
GTGCTGCTCG CTGGCAACTA CAACAAGACC AAGCTCGATC GTGTCGCGGG CACGCCGGCG
CCGCTCGCCG CGCTTGGCAT CACCACGCCG CTGTTCGACC TCACCCAGCA GGTGCGGATC
ACCGACAGCC AGCCGCGCTC GAAGGTGCTG CTCAACCTCA ACTGGTCGTC GGGCGACTTC
ACCGTCGGCC TGACCAACAC CTATTACGGC AAGGTCTCGG CGGTCGCGTT CACCACCCTG
ACGCCGGCGC AGATCGCGGT GCTGACCCAG AATTACGACG TGACCCTGGT GCCGGTCTCC
GCGACCAGCC CCAATTCGCA GGTCATCCAG CACTTCAAGG GCAAGCTGAT CACCGACCTC
CAGCTCTCCT ACGACATGAC GAAGGAGGTG CGGCTGACGG TCGGCGTCAA CAACCTGTTC
GACATCTATC CGTCGCAGAA CATCCGCTCG ACCGTCGCCA GCGTCGCGGC GGGGACCAAC
GGGTCGGACA ATGGTGGCAC CTTCCCCTAC AATGCCATCT CGCCCTTCGG GTTCAACGGC
ATGTCCTTCT TCGCCTCGGC GAGCGTCCGC TTCTGA
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| Protein sequence | MKKQIRTLSL TTTILFAGAV GIAPGSAQGV GPDPEGGADI VVTGSRFGSR SIAESPTPID
HIGTEELNRG GRVEIQEMLK TAVPSFSTPR PNASGVGDFT TPPTLRGLST GQLLVLVNGK
RRHSSGDLST SNGIGRGDVA YDFNSIPSAA IGHIEVLRDG ASAQYGSDAI AGVINLSLDK
SEGVSGKVTT GITKQGDGEY VDVGAGFGLA IGDGGIIRTT VQYQNRRGSN RADPDTRQQY
FGTNAAGAPT AISSFYGSGV GLTPSNGTLD PREATVDRDT SYEGTAPFTM KAIFVNSELP
VGDAVTLYGF GGYSDLDGKT ANFFRRAGQD QTVRSLHPDG YAPYGEFGLR NLSAFGGARG
DDLAGFGWDL STGFGKSLIN SDISNSNNPS LGNASPTEMR ISRIRFSQWT TNLDLTREFD
VGDSTPLKFA FGGEYRKEVW RLLAGDPASY VNGGVGIIGG PANGAVAPVG AQPNPGVSPA
DATTGKRNSK AVYGELEKEF FDRLTLNGAV RYEDFSDFGD TVNYKLSSRL KLVEALALRG
SFSTGFRAPH LAQSFFNSSL TNFINGAPVL IRNFPVDSAA GRLIGATPLK PEKSRNISIG
AVAKLSSWTI TLDGYRIKLK DRIVQSSTFQ DARLTNLLAA NGFPGIGGAQ YLTNAVDSTT
HGVDLTVSGS IDLDDFGKLA VLLAGNYNKT KLDRVAGTPA PLAALGITTP LFDLTQQVRI
TDSQPRSKVL LNLNWSSGDF TVGLTNTYYG KVSAVAFTTL TPAQIAVLTQ NYDVTLVPVS
ATSPNSQVIQ HFKGKLITDL QLSYDMTKEV RLTVGVNNLF DIYPSQNIRS TVASVAAGTN
GSDNGGTFPY NAISPFGFNG MSFFASASVR F
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