| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2580 |
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| Symbol | |
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| ID | 5197622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2863888 |
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| End bp | 2864496 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582136 |
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| Product | hypothetical protein |
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| Protein accession | YP_001263076 |
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| Protein GI | 148555494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.214724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGGCG GCCCGCAGGA GATCGGGTGT CCCGTGACCG TGGATTCCCG CTTTCGCGGG
AATGACGAAG AGGGACGTGA AGCCGGCTTC ACCCTGATCG AGCTGATGAT CTCGCTCGCG
CTGTTCGGGT TGATCGCGCT CGCGGGACTG GCGCTGGTCG ACAGCCTGAT GGGTATCCGC
GACCGCACCG AGGGCCGGCT CGACCGCCTC GCCGAGGTGC AGCGGGCGAT GTACGTGATC
GACAACGACC TGACCCAGAT CAGCCCCGGC CCGCTCCAGG GCGACGCCGC GACCGTGCGC
TTCAGCCGCC CGCTGGCGGC GGCGGGTGGG CTGCCGGTGC GGATCGACTA TCAGCTCGGC
GCCGGCACGC TGCTGCGCGG GGTGCGCGGG CGCGGCCTGC CGCAGGGGGC GCAGCGCATG
CTCCAGGGCG TCGCGGCGGT GCGCTGGAGC TATTACCGGC CGGGCGAGGG CTGGGTCGAC
CGCTGGCCGC CCGCGCCCGA GCTGGCCAAC CAATGGCCCG CCGCCGTCGC CGCCGACATC
GCGCTGGCGC CGGGCGGCAC GGTCGGCGGA TCGCTGCGGC GGGTCGTGCC GCTGCCGGTC
CATCCGTGA
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| Protein sequence | MEGGPQEIGC PVTVDSRFRG NDEEGREAGF TLIELMISLA LFGLIALAGL ALVDSLMGIR
DRTEGRLDRL AEVQRAMYVI DNDLTQISPG PLQGDAATVR FSRPLAAAGG LPVRIDYQLG
AGTLLRGVRG RGLPQGAQRM LQGVAAVRWS YYRPGEGWVD RWPPAPELAN QWPAAVAADI
ALAPGGTVGG SLRRVVPLPV HP
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