Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2564 |
Symbol | rplA |
ID | 5199021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2845021 |
End bp | 2845719 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582120 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_001263060 |
Protein GI | 148555478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0511824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC TGAGCAAGAA GCAGAAGAAC CAGGCCGCGT CGGTCGACAG CCAGAAGCTG TACGGCGTCG ATGAGGCGAT CGCCCTCGCC AAGCAGAACG CCACGTCGAA GTTCGACGAG ACGATCGAGG TCGCGCTGAA CCTGGGCGTC GATCCGCGCC ACGCCGACCA GATGGTCCGC GGCGTCGTCA CCCTGCCCAA GGGCACCGGC AAGGACGTCC GCGTCGGCGT GTTCGCCCGC GGCGCCAAGG CCGACGAAGC CAAGGCCGCC GGTGCCGAGG TCGTCGGCGC CGAAGACCTG CTCGAGACGA TCCAGGGCGG CACGGTCGAC TTCGACCGCT GCATCGCGAC CCCGGACATG ATGGGCCTGG TCGGCCGCCT CGGCAAGATC CTGGGCCCGA AGGGCCTGAT GCCGAACCCG AAGCTCGGCA CCGTGACGAT GAACGTCGCC GAAGCCGTCA AGGCGGCCAA GGGCGGCCAG GTGGAGTTCC GCGTCGAGAA GGCCGGCATC ATCCACTCGG GCATCGGCAA GGCGAGCTTC CCGGCCGAGG ACCTGCGCGC CAATTTCGAC GCGTTCGTCG ACGCGATCGT CAAGGCGAAG CCGACCGGCG CCAAGGGCAA GTACCTCAAG AAGGCCGCCG TCAGCTCGAC CATGGGCCCG GGCGTGAAGA TCGACGTGGC GGACGTCGCC GGCGCCTGA
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Protein sequence | MAKLSKKQKN QAASVDSQKL YGVDEAIALA KQNATSKFDE TIEVALNLGV DPRHADQMVR GVVTLPKGTG KDVRVGVFAR GAKADEAKAA GAEVVGAEDL LETIQGGTVD FDRCIATPDM MGLVGRLGKI LGPKGLMPNP KLGTVTMNVA EAVKAAKGGQ VEFRVEKAGI IHSGIGKASF PAEDLRANFD AFVDAIVKAK PTGAKGKYLK KAAVSSTMGP GVKIDVADVA GA
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