| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2500 |
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| Symbol | |
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| ID | 5199485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2775074 |
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| End bp | 2777275 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582048 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262997 |
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| Protein GI | 148555415 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAC GTGGAAACCA CCGGCGCATC GTCGCCGCAC TTCTGGCGAC GGCGACCGTC
GCGGCGCTGC CGTCGCCGGC CGCCGCCGCG CCGACGGCCG AGGACCGAAC CGGCGCCGAC
AATGGCGAGA TCGGGACGAT CGTCGTCACC GCGCGGCGCC GCGAGGAGAA TCTGCAGAAC
GTCCCCGACA CCATCACCGC CTTCTCGCCG GCGGTGATCG AGGAGCGCCG GCTCGACACG
ATCGGCGACT TCCTGCAGCT CACGCCTAAC GTCAACATCA CCGCCGACCA GGACGCCGCG
ACCAACAACA TCTCGATCCG CGGCCTGGGA TCGAACCGCA ACCAGGCGGC GGCGGTCGCC
TTCTCGGTCG ACGGGGTGAT CCTGCCCGAC GCCGACGCCT TCACCATGGA CCTGAGCGAC
GTCGAGCGGC TCGAGGTGCT GAAGGGGCCG CAGGGCGCGC TCTACGGCAA GGGGGCGATC
GCAGGCGCGA TCAACATCAC CACGCCGCGC CCGACCGACA CGATCGAGGG CAAGGCCGAG
ATCGGCTATG AGAGCGGCGA TATCTTCCGC GCCTTCGGCG CGATCGGCGG GCCGATCGCC
GGCGACAAGA TATTGGCGCG GCTCAGCGTC CTCTATCGCA ACGGCGACGG GACGATCGAC
AACGACCTGA CCGGCAAGCC CGCCAATCCG CAGGACCAGT TCCGCATCCG CGGCCGCGTG
ATCCTGCAGC CGAGCGAGGG GCTGGAGGTC GACCTGCGCG CCTCCTGGTA TGACGAGAAG
GCGGGCTCGG TCTATTTCAG CGGCTTCGAC GTGCTGGGCA CGACCGGCGG CGCGATCACC
GAGGACATCG CCGGCCGCAA CCCCAATTAT GACGGCCCGT CGAGCACCCG GCGCAAGGTC
ACCGACCTGT CGATGCTGGT CAATCTCGAC ACCGCGATCG GCACGCTGAC CGCGATCACC
GCCTATGACG ACATCAAGGT CGACTTCCAC GAGGATATCG AGGTGTCGCC CCTGCCGCTG
GTGCCCGACA CCAACCAGCT CCGCCGGACC AAGGGCTTCA GCCAGGAGCT GCGCCTGACG
TCCGCCGGGG ACCAGCCGCT GCGCTACATC CTCGGCGGCT ATTACCAGCG GACGACGCGC
GCGATCCGCA ACGTCGTCAC GCTCGACCTC TGCCTGTTCG CCGGGACCTG CTTCGCGCCG
GGCGGCGGCT TCACCTCGGG CGGGGTGCTG ACGACGCCGC TCGCCGACTA TGCCAGCCGC
TTCAACCAAT ATTCGCTGTT CGGCCAGCTC AACTACGACC TGACCGACCG GATCGAGCTG
ACCGCCGCGC TGCGCTACGA CACGATCGAC GGACGGCAGG ACGACAGGGC TGCCGGGGTC
GTCGACACGG CGACCTTCTC GCGGCTCCAG CCCAAGCTCA GCCTGTCCTA TCGCCCGACC
GAGGCGCTCA CCCTCTACGG AACCTATTCG CAGGGCTTCA AGAGCGGGGC GTTCAACCCG
GTGTCGGCGG GCCCCGGCTT CCCGCGCGTC GTCGCGCCGG AGGTGTCGAA GAATTACGAA
CTGGGCCTGC GCACCAGCCT GTTCGACCGG CGGGTTCGCG CCAATGTCGC GGCCTTCTAC
ACCCAGCATC TCAACCCGCA GATCTTCCAG CTCGACCCCG CGACCTTCGG GCAGGGATCG
CTCAACGCGA AGGAGGCGCG GATCAAGGGC TTCGAATTCG ACGTGGTCGC GCGGCCGACC
CGCTTCTGGG ACGTCAACGT CGCCTTCGGC TATGTCGACG CGAAGATCCA CGACTTCGAC
GGCGTCACCA ACGCCTATGT CGGGCAGCAG CTTCCCAACG CCCCGAAATA CACCCTCAAC
CTCGGGACCG GCTACCGCCT CCCCCTAAAA GACGACTTAA GCCTGCGGGT GCGGGCCGAC
TACAAGCTGA CCGGGCGCGA ATCGTTCCAG GATTTCCAGT TGCCGACCAA TCCCGACCTC
TACCTGTACC AGAAGGCGTT CGGGCTGCTC GACGGGCAGG TCGGGCTGGA GGCCGACCGC
TGGGCGGTGA CCGTGTTCGG GCGCAACCTG CTCAAGCGGC GCTACGCGAC CTCGGCCTTC
TCGCGCTACA TCTTCTCGGT GGCGCTGGTG CCGCTGGGCA CCGACGCGGT CCAGCCCGAT
CCCGGCCGCA CCTTCGGCGT CGAAGCGCGG GTGCGCTTCT GA
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| Protein sequence | MERRGNHRRI VAALLATATV AALPSPAAAA PTAEDRTGAD NGEIGTIVVT ARRREENLQN
VPDTITAFSP AVIEERRLDT IGDFLQLTPN VNITADQDAA TNNISIRGLG SNRNQAAAVA
FSVDGVILPD ADAFTMDLSD VERLEVLKGP QGALYGKGAI AGAINITTPR PTDTIEGKAE
IGYESGDIFR AFGAIGGPIA GDKILARLSV LYRNGDGTID NDLTGKPANP QDQFRIRGRV
ILQPSEGLEV DLRASWYDEK AGSVYFSGFD VLGTTGGAIT EDIAGRNPNY DGPSSTRRKV
TDLSMLVNLD TAIGTLTAIT AYDDIKVDFH EDIEVSPLPL VPDTNQLRRT KGFSQELRLT
SAGDQPLRYI LGGYYQRTTR AIRNVVTLDL CLFAGTCFAP GGGFTSGGVL TTPLADYASR
FNQYSLFGQL NYDLTDRIEL TAALRYDTID GRQDDRAAGV VDTATFSRLQ PKLSLSYRPT
EALTLYGTYS QGFKSGAFNP VSAGPGFPRV VAPEVSKNYE LGLRTSLFDR RVRANVAAFY
TQHLNPQIFQ LDPATFGQGS LNAKEARIKG FEFDVVARPT RFWDVNVAFG YVDAKIHDFD
GVTNAYVGQQ LPNAPKYTLN LGTGYRLPLK DDLSLRVRAD YKLTGRESFQ DFQLPTNPDL
YLYQKAFGLL DGQVGLEADR WAVTVFGRNL LKRRYATSAF SRYIFSVALV PLGTDAVQPD
PGRTFGVEAR VRF
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