| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2477 |
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| Symbol | |
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| ID | 5198684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2751039 |
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| End bp | 2753084 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582025 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262974 |
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| Protein GI | 148555392 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA TATCCCATTT CGCTCGCGGC GCCTCGGCGC TCGCGCTGCT CTGCCTGTCC
GCCGCCGCCC TCGCCGAGGA GGCCGAGGCC GATCGCGCCA CCATCATCGT CAACGCCCAG
ACCGTCGCCG ACGACGCCCG CGCGGCGGTC GAGAAGCGGC CCGGCGGCGT CGACGTCGTC
GAGGCGTCGG CCTTCGCCGA CAAGGTCGCC GTCAACCTGC GCGATGCACT CGCCTTCTCG
CCCGGCGTCT ACACCCAGCC GCGCTTCGGG CAGGAGGTCC GCCTGTCGAT CCGGGGATCG
GGGCTCAGCC GCGGCTTCCA CATGCGCGGG CTGACGCTGT TGCAGGACGG CATCCCGATC
AACCTGGCCG ACGACAATGG CGACTTCCAG GAGCTCGACC CGCAGGTCTT CGAGCGGATC
GAGGTCTATC GCGGCGCCAA TGCGCTGCGC TTCGGCGGAT CGACGCTGGG CGGCGCGATC
AACGCTGTCA CGCCGACCGG CCGGACCGCC CCGCGCTTCG AGCTGCGGGT CGACGGCGGC
AGCTATGGCA CGCTGCGGAC CAAGGCGGCG GCGGCCTTCG CCGATGCGCG CGGCGACGCC
TATGTCGCGC TGACCACCGA TCGTTCGGAC GGCGATCGCG ACCATGCGAA GCGCGACGCG
ATCCGCTTCA ACGGCAATGT CGGCCTGCGC CTGACCGATA CGATCGAGAC GCGCTTCTAC
GCAACGATCA GCCATATCGA CCAGGACCTG CCGGGCTCGC TGACCCTGGC GCAGGCGCTG
TCGACGCCGA AGCTGTCGCT GCCCGCCAAC ATCGCGATGG ATCAGGAGCG CGACGTCGAT
TCGGTCCGCC TCCAGAACCG CACCACGGTC GACCTCGGCA GCGGGCGGCT GAGCTTCGGC
GGCTTCTTCA ACGCCAAGAA GCTGTTCCAC CCGATCTTCC AGGTGCTCGA CCAGAAGAGC
AACGATCGCG GCGTCTTCGC CAGCCTCGAC CTGGCCGGCG AGCTGGGCGG CTTGCCCTGG
GAGGCGACGC TCGGCACCCA GGCGCGGTTC GGCACGGTCG CGGCGAAGCA GTTCGTCAAC
GTCGCGGGCC GACGCGGCGC GCCGACCGCC GACCAGCGCC AGACCGCGCG GACGATCAAC
AGCTATGGCG AGCTGCGGCT GCGGCCGATC GAGCCGCTGA CCCTGATCGC CGGCGGCGTC
TACACCAGCG GCGAGCGGCG GATCGTCAAC CGGCTCGCCC CGGCGCGCAG CGGCGAGGCC
GATTTCGACG CCTTCGCCCC CAAGCTCGGC CTGCTCTACG CGCCGTCGGC GGCGGTGCAG
CTCTTCGCCA ATGTCAGCCG CTCGGTCGAG CTGCCCGGCT TCAACGAGCT GAGCCAGACG
CCGAACACCG GCCTGCCGGG CTTCACCCCG GTCGGGGCGC AAAAGGCCTG GACGGTCGAG
ATCGGTACGC GCGGCCGCCA CGGCATCGCC GCCTGGGACA TCAGCTTCTA TCGCGCGGAC
CTGAAGGGCG AGATGCTGCA ATATGCGGTG AGCCCGATCA TCCCGGCGGC GACCTTCAAC
GCGGGGCGCA CCCGGCACCA GGGGATCGAG GCGGGGCTCG ACCTCCAGCT CGGCGCGCTG
ATCCGGCTGC GGCAGGTCTA TCAGTATAAC GACTTCCGCT TCCGCGACGA CGCCGTCTAT
GCCGATAACC GGCTGCCGGT GATCCCCCGG CACCAATATC GCGCCGAGCT GCGGCTGGGC
TTCGAGGGGC TCAACCTCAC TCCCAATGTC GAATGGGTGC CCGAGGGCGC CTGGGCCGAC
TATCGCAACA CGCTCCGCGC GCCGGGCTAT GCGACGATCG GCCTGGGGGC GGAGGCGCGG
CTCGCGCCCG GCGTCACGCT GTTCCTCGAC GCGCGCAACC TGACCGGCAA GAAGGCGGTC
GGCGACATCA GCGCGCTGGT CGCCTATGCG CCCGACAACC GCGCGACCCC GGCCGACGAG
GGCAGCGTCG CCTTCTACCC GATCGAGCGC CGCGCCTTCT ACGGCGGCCT GCGCATGACC
TTCTGA
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| Protein sequence | MNRISHFARG ASALALLCLS AAALAEEAEA DRATIIVNAQ TVADDARAAV EKRPGGVDVV
EASAFADKVA VNLRDALAFS PGVYTQPRFG QEVRLSIRGS GLSRGFHMRG LTLLQDGIPI
NLADDNGDFQ ELDPQVFERI EVYRGANALR FGGSTLGGAI NAVTPTGRTA PRFELRVDGG
SYGTLRTKAA AAFADARGDA YVALTTDRSD GDRDHAKRDA IRFNGNVGLR LTDTIETRFY
ATISHIDQDL PGSLTLAQAL STPKLSLPAN IAMDQERDVD SVRLQNRTTV DLGSGRLSFG
GFFNAKKLFH PIFQVLDQKS NDRGVFASLD LAGELGGLPW EATLGTQARF GTVAAKQFVN
VAGRRGAPTA DQRQTARTIN SYGELRLRPI EPLTLIAGGV YTSGERRIVN RLAPARSGEA
DFDAFAPKLG LLYAPSAAVQ LFANVSRSVE LPGFNELSQT PNTGLPGFTP VGAQKAWTVE
IGTRGRHGIA AWDISFYRAD LKGEMLQYAV SPIIPAATFN AGRTRHQGIE AGLDLQLGAL
IRLRQVYQYN DFRFRDDAVY ADNRLPVIPR HQYRAELRLG FEGLNLTPNV EWVPEGAWAD
YRNTLRAPGY ATIGLGAEAR LAPGVTLFLD ARNLTGKKAV GDISALVAYA PDNRATPADE
GSVAFYPIER RAFYGGLRMT F
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