| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2458 |
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| Symbol | |
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| ID | 5197384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2728912 |
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| End bp | 2730351 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582005 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001262955 |
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| Protein GI | 148555373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.266344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA ATTCCCGGCC CCCCGCGTCA GCGGAAAGCC TGATCGCCGG GCGCCTTGCC
ATAGCGGAGC GCCGCTGTCA AAAGCCGCGC CCTATGCATG CCTCCTCGCC CCGACCCGCC
AGCTTCTCGG CCCCCGGCCC GCTTCGCGGC AGCATCGCCG TGCCGGGCGA CAAGTCGATC
TCGCACCGCG CGCTGATGCT GTCGGCGCTG GCGATCGGCG AGAGCCGGGT CGAAGGGCTG
CTGACCGGCG AGGACGTCCT CGCCACCGCC GCCGCCATGC GCGCCATGGG CGCGTCGATC
GAGCGCGGCG ACGACGATGT CTGGCGCATC CACGGCGTCG GCGTCGGCGG GCTGCTCCAG
CCCGAGGGCG CGCTGGAGAT GGGCAATTCG GGCACCTCGA CCCGGCTGCT GATGGGCCTC
GTCGCCAGCC ACGCGATCAC CGCCACCTTC ACCGGCGACG CCTCGCTGTC GAAGCGGCCG
ATGAACCGGG TGATCGAGCC GCTGTCGCTG ATGGGCGCCG ACGTGACCGC CACCCCGGGC
GGCAAGGGCG GCACGCTGCC GCTGATGCTG CGCGGGATCA GCCCGGCGGT GCCGATCGAC
TATCGGCTTC CGGTCGCCTC GGCGCAGGTC AAGTCGGCGG TGCTGCTCGC CGGGCTCAAC
ACCCCCGGCA TCACCCGGGT GATCGAGCCG GTCGCGACCC GCGACCATAG CGAGCGGATG
CTCCGGGGCT TCGGCGCCGA GCTGGAGGTG GAGCAGGACG CCGACGGCGC GCGGATCATA
TCGATTCGCG GCGAGGCCGA GCTGCAGCCG CAGCATATCG TCGTGCCGGG CGATCCCTCC
TCGGCCGCCT TCCCGGTGGT CGCGGCGCTG CTCGTGCCGG GGTCGGCGGT GACGATCGCC
AATGTCGGCC TCAACCCCAC CCGCGCCGCG CTGTTCGACG TGCTGCGGAT GATGGGCGGC
GACATCGAAT TCGCCAATCC GCGTGAGGTC GGCGGGGAGC CGGTCGCCGA CATCGTCGTG
CGCCATTCGA CCCTGAAGGG CATCGAGACC CCGGTCGAGA CGGTCGCCTC GATGGTCGAC
GAATATCCGA TCCTGTTCGT CGCGGCGGCG CTGGCCGAGG GGCGCACCGT CGCGCGCGGG
CTGGAGGAGC TCCGGGTCAA GGAATCGGAC CGGATCGCGG TGATGGCCGA GGGGCTGCGC
GCGATCGGCG CCCGGGTCGA GGAGCTCGAG GACGGGCTGA TCATCGACGG CACCGGCGGC
GATCCGCTGC CGGGCGGCGC GACGATCGCC GCGCGACTCG ACCATCGCAT CGCGATGAGC
TTCGCGGTCG CGGGGCTGGT GTCGAAGGCG GCGGTGACGA TCGACGACAT GGGCCCGGTC
GCGACCAGCT TCCCGGGCTT CACCCGATTG ATGGGCGAGC TGGGGGCGGT CGCGGCATGA
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| Protein sequence | MKMNSRPPAS AESLIAGRLA IAERRCQKPR PMHASSPRPA SFSAPGPLRG SIAVPGDKSI
SHRALMLSAL AIGESRVEGL LTGEDVLATA AAMRAMGASI ERGDDDVWRI HGVGVGGLLQ
PEGALEMGNS GTSTRLLMGL VASHAITATF TGDASLSKRP MNRVIEPLSL MGADVTATPG
GKGGTLPLML RGISPAVPID YRLPVASAQV KSAVLLAGLN TPGITRVIEP VATRDHSERM
LRGFGAELEV EQDADGARII SIRGEAELQP QHIVVPGDPS SAAFPVVAAL LVPGSAVTIA
NVGLNPTRAA LFDVLRMMGG DIEFANPREV GGEPVADIVV RHSTLKGIET PVETVASMVD
EYPILFVAAA LAEGRTVARG LEELRVKESD RIAVMAEGLR AIGARVEELE DGLIIDGTGG
DPLPGGATIA ARLDHRIAMS FAVAGLVSKA AVTIDDMGPV ATSFPGFTRL MGELGAVAA
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