Gene Swit_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2391 
Symbol 
ID5198728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2655594 
End bp2656562 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID640581937 
ProductCBS domain-containing protein 
Protein accessionYP_001262888 
Protein GI148555306 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAT GGGATTGCCC CCCGGTGCCC ATTTCGGTTA GCGAATCAGC GCGAGAGAAC 
GGCGCAAGAA AGACGATGCC CGACGACAGT AGTAGCAGCG CCGCGGACAG CGGCGGACGA
TGGTGGCGCG GACTGCGCTC GCTCTTTGCA CCCGAGCAAG AGCCCAGTCT GCGCGACCAG
ATCGAGGAAG TCATCGAGGA GCATGAAGGC GATGGCGGCG AAGGGGACGA CCTGTCCTCC
GCCGAGCGCG AGATGCTCCG CAACATCCTG CATTTCGGCG AACGCACCGT CGGCGACATC
GGCGTGCCGC GCGGCGACAT CGTCGCGGTG CCCGAGGCGA TCGGCTTCGA CGAGTTGGTC
GCCCGCTTCG CCGAGGCCGA GCACAGCCGC CTGCCCGTCT ATGGCGAGGA TCTCGACCAC
GTCACCGGCA TGATCCACGT CAAGGACGTG TTCCGGATCA TCGCGACCGG CGCGGCGCGG
CCCGCGACGA TCGCCGGGCT GATCCGCCAG CCGCGCTACG TGCCCTCGTC GATGCGGATC
ATCGACCTGC TCGCCGAGAT GCGCGAGACG CGCACCCATC TGGCGATCGT CCTCAACGAA
TATAGCGGCA CCGACGGGCT GGTGACGATC GAGGACCTGG TCGAGGAGAT CGTCGGCGAC
ATCGAGGACG AGCATGACGA GAAGGAAGCC GACCTGCTCG TGCCGCTCGA CGACGCGATC
TGGTCGGCCG ACGCCCGCGC CGAACTGGAG GACGTCGCCC GGTTGATCGA CCCCCGGCTC
GCCGACATCG ACGACGACGT CGAGACGTTG GGCGGCCTCG CCTCCGCGCT GGCGGGGCAG
GTGCCGCAGG CGGGGCAGAT CGTCGAGCAT CCGAGCGGCT GGCGGCTCGA GATCACCGAT
GCCGACGAGC GCCGGGTGCG GCAGATGCTG CTCCACCCGC CGGCCGACGC CCATGGTCGG
GAAAGCTGA
 
Protein sequence
MQRWDCPPVP ISVSESAREN GARKTMPDDS SSSAADSGGR WWRGLRSLFA PEQEPSLRDQ 
IEEVIEEHEG DGGEGDDLSS AEREMLRNIL HFGERTVGDI GVPRGDIVAV PEAIGFDELV
ARFAEAEHSR LPVYGEDLDH VTGMIHVKDV FRIIATGAAR PATIAGLIRQ PRYVPSSMRI
IDLLAEMRET RTHLAIVLNE YSGTDGLVTI EDLVEEIVGD IEDEHDEKEA DLLVPLDDAI
WSADARAELE DVARLIDPRL ADIDDDVETL GGLASALAGQ VPQAGQIVEH PSGWRLEITD
ADERRVRQML LHPPADAHGR ES